Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 MIR873-201ENST00000401120 77 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AL139095.1-201ENST00000404326 391 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 MIR1185-2-201ENST00000408687 86 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 RNU2-70P-201ENST00000410718 179 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 HSPE1P12-201ENST00000412576 301 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AL161651.1-201ENST00000440882 223 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC010531.2-201ENST00000465012 153 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 SRIP1-201ENST00000489235 288 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC105137.2-201ENST00000569073 466 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 MIR4425-201ENST00000580572 84 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC005972.2-201ENST00000604690 348 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AC069200.1-201ENST00000609511 323 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
FOXR1Q6PIV2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
FOXR1Q6PIV2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 RNU6-1014P-201ENST00000383940 103 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 MIR891A-201ENST00000401237 79 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 EDDM3CP-201ENST00000415977 425 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 RN7SKP12-201ENST00000516275 143 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 HSPE1P18-201ENST00000517602 280 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 AL442128.1-201ENST00000615151 90 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXR1Q6PIV2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 MIR29B2-201ENST00000385055 81 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 MIR1302-5-201ENST00000408164 150 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 RNA5SP239-201ENST00000410218 129 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 AL133547.1-201ENST00000448546 220 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 RPL23AP62-201ENST00000463396 453 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 AC027419.1-201ENST00000522976 328 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 AC011602.1-201ENST00000546484 331 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 HMGN2P15-201ENST00000585707 270 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 AL929325.1-201ENST00000603096 117 ntBASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXR1Q6PIV2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC000403.1-201ENST00000613696 3585 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 SNORA27.1-201ENST00000362604 124 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AL645939.1-201ENST00000453429 797 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 RN7SL330P-201ENST00000469709 307 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 RPL39P34-201ENST00000477141 156 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 ATP5EP1-201ENST00000510257 156 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 RNA5SP153-201ENST00000516498 76 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC012442.3-202ENST00000636742 206 ntBASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXR1Q6PIV2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RNA5SP124-201ENST00000362739 110 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORA63.5-201ENST00000363548 123 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 U3.15-201ENST00000365398 212 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORD14D-201ENST00000384390 87 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 MIR7-3-201ENST00000384898 110 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RNA5SP511-201ENST00000410487 115 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORA19.1-201ENST00000410656 129 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RPS26P55-201ENST00000471178 356 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORD77.4-201ENST00000516158 81 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORA70.14-201ENST00000516205 110 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 SNORA18.4-201ENST00000516440 124 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 Y_RNA.685-201ENST00000516532 108 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RNU7-116P-201ENST00000516940 62 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RNU6-365P-201ENST00000517113 106 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 RPS15AP11-201ENST00000594193 385 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 AC097639.2-201ENST00000603159 172 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 AL121772.2-201ENST00000614331 297 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 AC012314.7-201ENST00000619693 93 ntBASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXR1Q6PIV2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms