Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNA5SP119-201ENST00000362715 117 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-103P-201ENST00000363686 107 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORA14A-201ENST00000364773 135 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORD14D-201ENST00000384390 87 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR29B2-201ENST00000385055 81 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MT-TT-201ENST00000387460 66 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL159169.1-201ENST00000421119 127 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU7-121P-201ENST00000516604 62 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC022616.8-201ENST00000533569 253 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR3684-201ENST00000579779 74 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1Q5Y7H0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQA1Q5Y7H0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HLA-DQA1Q5Y7H0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-944P-201ENST00000364023 107 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-22P-201ENST00000384355 107 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 Y_RNA.586-201ENST00000391146 98 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL355796.1-201ENST00000406706 323 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA70.12-201ENST00000516084 153 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA70.14-201ENST00000516205 110 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC109810.1-201ENST00000534066 224 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC100821.1-201ENST00000523153 2479 ntBASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1Q5Y7H0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 U8.7-201ENST00000364940 136 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR569-201ENST00000385228 96 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR1283-1-201ENST00000408494 87 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR1294-201ENST00000408503 142 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL121890.1-201ENST00000435457 205 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 HSPE1P21-201ENST00000438283 308 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC117454.1-201ENST00000491120 168 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNA5SP112-201ENST00000515937 99 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4474-201ENST00000579189 78 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1Q5Y7H0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNA5SP72-201ENST00000364442 117 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA20B-201ENST00000384220 132 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR616-201ENST00000385293 97 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR526A2-201ENST00000390198 65 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA11-201ENST00000408789 128 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-257P-201ENST00000410238 98 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU2-51P-201ENST00000410708 197 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-383P-201ENST00000410864 94 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR3944-201ENST00000581277 108 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC023043.3-201ENST00000593113 385 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR3658-201ENST00000636291 56 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC068647.2-201ENST00000637380 353 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms