Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 Y_RNA.380-201ENST00000365663 111 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNU6-418P-201ENST00000384035 107 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.455-201ENST00000384230 98 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.527-201ENST00000384573 102 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNU6-985P-201ENST00000410182 104 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 AL139132.1-201ENST00000431587 344 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 MTCO1P44-201ENST00000441935 243 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 AL357134.1-201ENST00000445848 426 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNU6-408P-201ENST00000515910 100 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
RNF220Q5VTB9 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.56□□□□□ -2
RNF220Q5VTB9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RNF220Q5VTB9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.56□□□□□ -2
RNF220Q5VTB9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
RNF220Q5VTB9 SNORA70.4-201ENST00000365509 134 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 RNU6-1160P-201ENST00000384546 104 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 RNU6-160P-201ENST00000384591 107 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 MIR606-201ENST00000384851 96 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 SNORA40.19-201ENST00000390846 128 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 MIR1252-201ENST00000408861 65 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 RNA5SP270-201ENST00000411361 118 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC139712.2-201ENST00000424302 339 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
RNF220Q5VTB9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.56□□□□□ -2
RNF220Q5VTB9 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 RPS29P26-201ENST00000477483 171 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.56□□□□□ -2
RNF220Q5VTB9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.56□□□□□ -2
RNF220Q5VTB9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.56□□□□□ -2
RNF220Q5VTB9 MIR5195-201ENST00000583555 115 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC130454.1-201ENST00000622948 401 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 snoZ196.1-201ENST00000625269 89 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 AC099654.10-201ENST00000640395 161 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RNF220Q5VTB9 LINC02555-201ENST00000563933 1951 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
RNF220Q5VTB9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF220Q5VTB9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 RNA5SP475-201ENST00000410568 110 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 TOMM22P2-201ENST00000430735 237 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
RNF220Q5VTB9 AC016717.1-201ENST00000448918 286 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 RNU6-498P-201ENST00000459468 107 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 RPL26P26-201ENST00000480251 434 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 AC107222.1-201ENST00000510899 637 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 RNU6-764P-201ENST00000516396 105 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.55□□□□□ -2
RNF220Q5VTB9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 AC013412.1-201ENST00000610687 192 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
RNF220Q5VTB9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RNF220Q5VTB9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
RNF220Q5VTB9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
RNF220Q5VTB9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
RNF220Q5VTB9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
RNF220Q5VTB9 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 MIR410-201ENST00000362222 80 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 SNORD115-3-201ENST00000363100 82 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 RNU6-961P-201ENST00000363893 105 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.54□□□□□ -2
RNF220Q5VTB9 RAB28P5-201ENST00000427490 651 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 RPEP5-201ENST00000441137 268 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 RNU1-131P-201ENST00000458943 161 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 AC113195.1-201ENST00000579952 141 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
RNF220Q5VTB9 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
RNF220Q5VTB9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.54□□□□□ -2
RNF220Q5VTB9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.54□□□□□ -2
RNF220Q5VTB9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF220Q5VTB9 MIR208A-201ENST00000362287 71 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 RNU6-57P-201ENST00000411348 103 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.53□□□□□ -2
RNF220Q5VTB9 AL355297.3-201ENST00000604082 446 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms