Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 TUG1_4.1-201ENST00000619464 181 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 AC068647.2-201ENST00000637380 353 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
RTN1Q16799 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTN1Q16799 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN1Q16799 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RTN1Q16799 AL049781.1-201ENST00000623195 3585 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RTN1Q16799 SNORA71.3-201ENST00000362582 128 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 Y_RNA.124-201ENST00000363339 93 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 SNORA51.4-201ENST00000364993 124 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RTN1Q16799 MIR1185-2-201ENST00000408687 86 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 RPL23AP58-201ENST00000440453 469 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 AC117454.1-201ENST00000491120 168 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.93□□□□□ -1.78
RTN1Q16799 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN1Q16799 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN1Q16799 MIR4444-1-201ENST00000581696 74 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 MIR4444-2-201ENST00000584390 74 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 MIR548AY-201ENST00000617669 107 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN1Q16799 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN1Q16799 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RTN1Q16799 AC017071.1-201ENST00000564407 2204 ntBASIC3.93□□□□□ -1.78
RTN1Q16799 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN1Q16799 U8.7-201ENST00000364940 136 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 Y_RNA.521-201ENST00000384560 114 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 MIR518C-201ENST00000384822 101 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 RNU6-383P-201ENST00000410864 94 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 Z98742.2-201ENST00000431564 187 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 CYCSP35-201ENST00000451978 304 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 HMGN2P9-201ENST00000476875 229 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 RNU4-57P-201ENST00000515980 135 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 RNU6-561P-201ENST00000516222 102 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 RNU6-1098P-201ENST00000516772 96 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 AC008739.2-201ENST00000597006 317 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN1Q16799 AC011603.4-201ENST00000611325 277 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 AC090517.3-201ENST00000625170 141 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 U6.105-201ENST00000637379 88 ntBASIC3.92□□□□□ -1.78
RTN1Q16799 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN1Q16799 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN1Q16799 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RTN1Q16799 RNU1-33P-201ENST00000364249 162 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 SNORD32B-201ENST00000364460 84 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 MIR873-201ENST00000401120 77 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN1Q16799 AC097463.2-201ENST00000421074 142 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN1Q16799 AC021205.2-201ENST00000480069 347 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 RPS27P26-201ENST00000494583 239 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 NDUFB9P3-201ENST00000521269 501 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 MIR6844-201ENST00000637122 62 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTN1Q16799 AC058791.1-201ENST00000608412 3198 ntBASIC3.91□□□□□ -1.78
RTN1Q16799 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RTN1Q16799 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN1Q16799 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN1Q16799 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.78
RTN1Q16799 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.78
RTN1Q16799 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.9□□□□□ -1.78
RTN1Q16799 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTN1Q16799 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN1Q16799 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN1Q16799 RNU6-80P-201ENST00000384195 107 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 RNU6-429P-201ENST00000384582 108 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR183-201ENST00000384958 110 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR184-201ENST00000384962 84 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR29B2-201ENST00000385055 81 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR767-201ENST00000390228 109 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 SNORA36B-201ENST00000410438 131 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 AC093578.1-201ENST00000415219 368 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN1Q16799 RPL23AP7-203ENST00000449021 469 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN1Q16799 RNU7-197P-201ENST00000458836 62 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 RNU7-115P-201ENST00000516433 55 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR3646-201ENST00000578301 84 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 MIR4276-201ENST00000584832 70 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 RPL30P11-203ENST00000598995 310 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 AC008739.3-201ENST00000603262 127 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN1Q16799 ZNF702P-202ENST00000434269 1966 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 AC000403.1-201ENST00000613696 3585 ntBASIC3.9□□□□□ -1.79
RTN1Q16799 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN1Q16799 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN1Q16799 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN1Q16799 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RTN1Q16799 SNORD114-7-201ENST00000362520 77 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RNU6-768P-201ENST00000384683 107 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RNU6-460P-201ENST00000391158 108 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 AL139095.1-201ENST00000404326 391 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms