Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 MTND5P10-201ENST00000603719 1809 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 RNU1-42P-201ENST00000364033 160 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 RNU6-1305P-201ENST00000364353 104 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 RNU4-9P-201ENST00000364951 139 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 MIR1323-201ENST00000408090 73 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 MIR1304-201ENST00000408243 91 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.94□□□□□ -2.1
CALD1Q05682 MTATP6P13-201ENST00000438531 667 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 MTND1P34-201ENST00000438556 671 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.94□□□□□ -2.1
CALD1Q05682 snoU13.30-201ENST00000458951 104 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 AC023790.1-201ENST00000482174 347 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.94□□□□□ -2.1
CALD1Q05682 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.94□□□□□ -2.1
CALD1Q05682 AC093913.1-201ENST00000614178 329 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.94□□□□□ -2.1
CALD1Q05682 MTND4P5-201ENST00000435821 1374 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 BX322639.1-202ENST00000423987 2213 ntBASIC1.94□□□□□ -2.1
CALD1Q05682 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CALD1Q05682 AC007098.1-201ENST00000420122 367 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 MTND4LP16-201ENST00000440828 295 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.93□□□□□ -2.1
CALD1Q05682 AC067942.3-201ENST00000512025 362 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 RNU4-49P-201ENST00000516080 140 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 RNU1-117P-201ENST00000517041 158 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 RNA5SP454-201ENST00000517231 127 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.93□□□□□ -2.1
CALD1Q05682 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.93□□□□□ -2.1
CALD1Q05682 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 AL645939.4-201ENST00000604495 135 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.93□□□□□ -2.1
CALD1Q05682 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CALD1Q05682 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CALD1Q05682 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CALD1Q05682 RNU6-1059P-201ENST00000363752 98 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CALD1Q05682 MIR1277-201ENST00000408536 78 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.92□□□□□ -2.1
CALD1Q05682 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.92□□□□□ -2.1
CALD1Q05682 RPL30P10-201ENST00000488148 337 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.92□□□□□ -2.1
CALD1Q05682 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
CALD1Q05682 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
CALD1Q05682 AC027514.1-201ENST00000588561 1603 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CALD1Q05682 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 Y_RNA.86-201ENST00000363020 111 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 RNU1-96P-201ENST00000364163 162 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 RNU6-1013P-201ENST00000384180 107 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 RNU6-975P-201ENST00000384296 105 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AL354695.1-201ENST00000427935 228 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC245047.4-201ENST00000433189 144 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.91□□□□□ -2.1
CALD1Q05682 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.91□□□□□ -2.1
CALD1Q05682 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 RNA5SP384-201ENST00000516615 116 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 RNU6-566P-201ENST00000516790 107 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
CALD1Q05682 AC015720.1-201ENST00000565251 277 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC068790.6-201ENST00000602558 258 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AP003465.2-201ENST00000602571 373 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.91□□□□□ -2.1
CALD1Q05682 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC007014.2-201ENST00000615581 479 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AC126177.8-201ENST00000618339 1015 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 AL359697.1-201ENST00000624879 587 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
CALD1Q05682 AC068137.4-201ENST00000638485 296 ntBASIC1.91□□□□□ -2.1
CALD1Q05682 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.1
CALD1Q05682 MIR424-201ENST00000362227 98 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 Y_RNA.319-201ENST00000365138 92 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 Y_RNA.533-201ENST00000384596 114 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 MIR320A-201ENST00000385302 82 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 AL117342.1-201ENST00000404861 406 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 MIR320B2-201ENST00000408479 138 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.9□□□□□ -2.11
CALD1Q05682 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.9□□□□□ -2.11
CALD1Q05682 AC114982.1-201ENST00000469402 321 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 RNU6-948P-201ENST00000516374 107 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.9□□□□□ -2.11
CALD1Q05682 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.9□□□□□ -2.11
CALD1Q05682 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.9□□□□□ -2.11
CALD1Q05682 AP000942.3-201ENST00000603702 160 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 MIR6128-201ENST00000615528 109 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 AC009248.2-201ENST00000619826 254 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 AC006001.4-201ENST00000622243 395 ntBASIC1.9□□□□□ -2.11
CALD1Q05682 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.89□□□□□ -2.11
CALD1Q05682 U8.1-201ENST00000362843 134 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 SNORD115-32-201ENST00000364079 82 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 Y_RNA.301-201ENST00000364990 103 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 RNU6-1235P-201ENST00000384559 107 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 MIR586-201ENST00000385035 97 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 MIR153-2-201ENST00000385225 87 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms