Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC093850.1-201ENST00000454121 251 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.14□□□□□ -2.39
HIST1H3AP68431 SNORD111.1-201ENST00000516421 86 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 RNU6-1110P-201ENST00000516462 101 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 SCARNA24.1-201ENST00000516465 137 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC025647.1-201ENST00000517879 253 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC109810.1-201ENST00000534066 224 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AP000907.4-201ENST00000604143 237 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 SNORA28-201ENST00000606769 126 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC104010.1-201ENST00000616889 150 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AL049777.1-201ENST00000622740 518 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 snoZ196.1-201ENST00000625269 89 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 RNU6-1242P-201ENST00000391052 103 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 Y_RNA.608-201ENST00000410647 95 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AC004866.1-201ENST00000411748 78 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AL354692.1-201ENST00000423044 315 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H3AP68431 CALM2P4-201ENST00000430810 426 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 MTCO2P7-201ENST00000446518 666 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 RPS20P10-201ENST00000451209 253 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.13□□□□□ -2.39
HIST1H3AP68431 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H3AP68431 AC106038.2-201ENST00000520706 568 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 MTND1P15-201ENST00000579262 949 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AC004832.4-201ENST00000608952 331 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AL031667.3-201ENST00000620124 655 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 AL078596.1-201ENST00000624856 447 ntBASIC0.13□□□□□ -2.39
HIST1H3AP68431 SNORA20.2-201ENST00000383922 131 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 RNU6-157P-201ENST00000383957 107 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 Y_RNA.480-201ENST00000384364 102 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 RNU6-636P-201ENST00000384598 107 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 RNA5SP511-201ENST00000410487 115 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 RNA5SP504-201ENST00000410676 117 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 TPT1P7-201ENST00000458300 517 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 AC022868.1-201ENST00000517767 391 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST1H3AP68431 AL136317.1-201ENST00000612653 226 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 AC009159.2-201ENST00000617603 606 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 AC011155.2-201ENST00000623202 216 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 AC022418.1-201ENST00000624118 445 ntBASIC0.12□□□□□ -2.39
HIST1H3AP68431 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
HIST1H3AP68431 RNU6-793P-201ENST00000384233 104 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 MIR216A-201ENST00000385063 110 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 MIR140-201ENST00000385282 100 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 AL596276.1-201ENST00000434465 418 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST1H3AP68431 snoU13.25-201ENST00000458945 104 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 RNU7-94P-201ENST00000459576 63 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 MTCO2P6-201ENST00000463134 685 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.11□□□□□ -2.39
HIST1H3AP68431 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST1H3AP68431 RNU7-128P-201ENST00000517247 62 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.11□□□□□ -2.39
HIST1H3AP68431 AC002044.1-201ENST00000606707 158 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 MTND5P17-201ENST00000418405 1603 ntBASIC0.11□□□□□ -2.39
HIST1H3AP68431 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
HIST1H3AP68431 U8.16-201ENST00000391279 133 ntBASIC0.1□□□□□ -2.39
HIST1H3AP68431 MTND4LP26-201ENST00000518144 282 ntBASIC0.1□□□□□ -2.39
HIST1H3AP68431 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
HIST1H3AP68431 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
HIST1H3AP68431 RNA5SP264-201ENST00000363115 107 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU6-424P-201ENST00000384367 105 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU6-393P-201ENST00000384475 107 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU6-342P-201ENST00000384521 104 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST1H3AP68431 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST1H3AP68431 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU6-221P-201ENST00000459541 99 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 AC092989.1-201ENST00000481235 277 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU7-12P-201ENST00000516030 62 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU7-99P-201ENST00000516271 62 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 SNORA25.17-201ENST00000517184 124 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RSL24D1P11-201ENST00000591045 491 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 AC069431.2-201ENST00000604149 1099 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 RNU6-94P-201ENST00000607728 107 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 SEPT14P17-201ENST00000617978 177 ntBASIC0.09□□□□□ -2.4
HIST1H3AP68431 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
HIST1H3AP68431 MIR103A2-201ENST00000362154 78 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 Y_RNA.265-201ENST00000364677 108 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 AL663109.1-201ENST00000411498 844 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.08□□□□□ -2.4
HIST1H3AP68431 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.08□□□□□ -2.4
HIST1H3AP68431 MTCO1P19-201ENST00000443487 500 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 EPS15P1-201ENST00000448836 336 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 AC010493.1-201ENST00000513479 292 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 Y_RNA.672-201ENST00000516289 104 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 RNU6-323P-201ENST00000521915 107 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.08□□□□□ -2.4
HIST1H3AP68431 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
HIST1H3AP68431 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms