Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.56□□□□□ -2
SUMO3P55854 TOMM22P2-201ENST00000430735 237 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.56□□□□□ -2
SUMO3P55854 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
SUMO3P55854 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
SUMO3P55854 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
SUMO3P55854 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.56□□□□□ -2
SUMO3P55854 RNU6-397P-201ENST00000516226 104 ntBASIC2.56□□□□□ -2
SUMO3P55854 RNU2-34P-201ENST00000516534 121 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.56□□□□□ -2
SUMO3P55854 AC087441.2-201ENST00000529141 262 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.56□□□□□ -2
SUMO3P55854 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
SUMO3P55854 MIR3674-201ENST00000636576 68 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC009487.2-201ENST00000420969 6821 ntBASIC2.56□□□□□ -2
SUMO3P55854 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
SUMO3P55854 AL161431.1-201ENST00000618966 4205 ntBASIC2.56□□□□□ -2
SUMO3P55854 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
SUMO3P55854 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.55□□□□□ -2
SUMO3P55854 Y_RNA.99-201ENST00000363138 105 ntBASIC2.55□□□□□ -2
SUMO3P55854 RNU6-1105P-201ENST00000384774 107 ntBASIC2.55□□□□□ -2
SUMO3P55854 RPL21P1-201ENST00000399532 476 ntBASIC2.55□□□□□ -2
SUMO3P55854 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
SUMO3P55854 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
SUMO3P55854 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
SUMO3P55854 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.55□□□□□ -2
SUMO3P55854 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
SUMO3P55854 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
SUMO3P55854 AC005002.2-201ENST00000438228 269 ntBASIC2.55□□□□□ -2
SUMO3P55854 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
SUMO3P55854 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.55□□□□□ -2
SUMO3P55854 MTATP8P1-201ENST00000467115 207 ntBASIC2.55□□□□□ -2
SUMO3P55854 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.55□□□□□ -2
SUMO3P55854 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
SUMO3P55854 LINC02555-201ENST00000563933 1951 ntBASIC2.55□□□□□ -2
SUMO3P55854 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
SUMO3P55854 ZNF861P-201ENST00000588126 639 ntBASIC2.55□□□□□ -2
SUMO3P55854 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
SUMO3P55854 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
SUMO3P55854 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
SUMO3P55854 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.54□□□□□ -2
SUMO3P55854 Y_RNA.143-201ENST00000363520 106 ntBASIC2.54□□□□□ -2
SUMO3P55854 RNU6-1235P-201ENST00000384559 107 ntBASIC2.54□□□□□ -2
SUMO3P55854 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
SUMO3P55854 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
SUMO3P55854 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
SUMO3P55854 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.54□□□□□ -2
SUMO3P55854 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
SUMO3P55854 AC107083.1-201ENST00000439643 279 ntBASIC2.54□□□□□ -2
SUMO3P55854 MTCO1P44-201ENST00000441935 243 ntBASIC2.54□□□□□ -2
SUMO3P55854 RNU6-498P-201ENST00000459468 107 ntBASIC2.54□□□□□ -2
SUMO3P55854 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
SUMO3P55854 AC008269.2-201ENST00000561915 1105 ntBASIC2.54□□□□□ -2
SUMO3P55854 MIR3200-201ENST00000580767 85 ntBASIC2.54□□□□□ -2
SUMO3P55854 MIR4423-201ENST00000580922 80 ntBASIC2.54□□□□□ -2
SUMO3P55854 AC005176.2-201ENST00000596933 147 ntBASIC2.54□□□□□ -2
SUMO3P55854 AL162730.1-201ENST00000605734 292 ntBASIC2.54□□□□□ -2
SUMO3P55854 AC130454.1-201ENST00000622948 401 ntBASIC2.54□□□□□ -2
SUMO3P55854 snoZ196.1-201ENST00000625269 89 ntBASIC2.54□□□□□ -2
SUMO3P55854 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SUMO3P55854 Y_RNA.133-201ENST00000363428 110 ntBASIC2.53□□□□□ -2
SUMO3P55854 RNU1-91P-201ENST00000364746 163 ntBASIC2.53□□□□□ -2
SUMO3P55854 RNU6-418P-201ENST00000384035 107 ntBASIC2.53□□□□□ -2
SUMO3P55854 MIR181A2-201ENST00000384863 110 ntBASIC2.53□□□□□ -2
SUMO3P55854 AL390729.2-201ENST00000416137 156 ntBASIC2.53□□□□□ -2
SUMO3P55854 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.53□□□□□ -2
SUMO3P55854 AL731563.1-201ENST00000442202 214 ntBASIC2.53□□□□□ -2
SUMO3P55854 AL135938.1-201ENST00000443141 297 ntBASIC2.53□□□□□ -2
SUMO3P55854 AL357134.1-201ENST00000445848 426 ntBASIC2.53□□□□□ -2
SUMO3P55854 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
SUMO3P55854 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.53□□□□□ -2
SUMO3P55854 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
SUMO3P55854 RNY3P15-201ENST00000516297 97 ntBASIC2.53□□□□□ -2
SUMO3P55854 RNU6-635P-201ENST00000516651 102 ntBASIC2.53□□□□□ -2
SUMO3P55854 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
SUMO3P55854 AL109918.3-201ENST00000603072 338 ntBASIC2.53□□□□□ -2
SUMO3P55854 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
SUMO3P55854 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SUMO3P55854 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
SUMO3P55854 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SUMO3P55854 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 Y_RNA.176-201ENST00000363815 109 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 SNORA48.2-201ENST00000390926 124 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 SNORD115-46-201ENST00000390982 71 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 AL139095.1-201ENST00000404326 391 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 MIR1262-201ENST00000408276 93 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.52□□□□□ -2.01
SUMO3P55854 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
SUMO3P55854 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.52□□□□□ -2.01
SUMO3P55854 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.52□□□□□ -2.01
SUMO3P55854 RNA5SP137-201ENST00000516833 135 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.52□□□□□ -2.01
SUMO3P55854 AC004467.1-201ENST00000615678 330 ntBASIC2.52□□□□□ -2.01
SUMO3P55854 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.52□□□□□ -2.01
SUMO3P55854 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SUMO3P55854 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SUMO3P55854 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms