Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC093010.3-201ENST00000570269 15214 ntBASIC3.27□□□□□ -1.89
MRE11P49959 RNU6-1159P-201ENST00000362933 107 ntBASIC3.27□□□□□ -1.89
MRE11P49959 VTRNA1-1-201ENST00000363120 99 ntBASIC3.27□□□□□ -1.89
MRE11P49959 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
MRE11P49959 AL033519.2-201ENST00000403958 392 ntBASIC3.27□□□□□ -1.89
MRE11P49959 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
MRE11P49959 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.27□□□□□ -1.89
MRE11P49959 AL161651.1-201ENST00000440882 223 ntBASIC3.27□□□□□ -1.89
MRE11P49959 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
MRE11P49959 AC245517.4-201ENST00000448601 281 ntBASIC3.27□□□□□ -1.89
MRE11P49959 snoU13.28-201ENST00000459235 104 ntBASIC3.27□□□□□ -1.89
MRE11P49959 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.27□□□□□ -1.89
MRE11P49959 RNU6-567P-201ENST00000516746 107 ntBASIC3.27□□□□□ -1.89
MRE11P49959 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.27□□□□□ -1.89
MRE11P49959 AC002064.3-201ENST00000623448 346 ntBASIC3.27□□□□□ -1.89
MRE11P49959 MIR622-201ENST00000638396 96 ntBASIC3.27□□□□□ -1.89
MRE11P49959 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRE11P49959 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
MRE11P49959 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRE11P49959 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.26□□□□□ -1.89
MRE11P49959 MIR6073-201ENST00000352083 89 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RNU6-626P-201ENST00000363354 107 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RNU6-961P-201ENST00000363893 105 ntBASIC3.26□□□□□ -1.89
MRE11P49959 Y_RNA.338-201ENST00000365320 114 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
MRE11P49959 SNORA53-201ENST00000391141 249 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
MRE11P49959 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
MRE11P49959 MIR1298-201ENST00000408783 112 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RNU4-61P-201ENST00000411243 107 ntBASIC3.26□□□□□ -1.89
MRE11P49959 RPS26P42-201ENST00000413485 326 ntBASIC3.26□□□□□ -1.89
MRE11P49959 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.26□□□□□ -1.89
MRE11P49959 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.26□□□□□ -1.89
MRE11P49959 AC012306.1-201ENST00000423267 114 ntBASIC3.26□□□□□ -1.89
MRE11P49959 AC063976.3-201ENST00000426849 329 ntBASIC3.26□□□□□ -1.89
MRE11P49959 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.26□□□□□ -1.89
MRE11P49959 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.26□□□□□ -1.89
MRE11P49959 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.26□□□□□ -1.89
MRE11P49959 AL078605.1-201ENST00000603529 500 ntBASIC3.26□□□□□ -1.89
MRE11P49959 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRE11P49959 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRE11P49959 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
MRE11P49959 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.25□□□□□ -1.89
MRE11P49959 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.25□□□□□ -1.89
MRE11P49959 Y_RNA.44-201ENST00000362676 108 ntBASIC3.25□□□□□ -1.89
MRE11P49959 Y_RNA.76-201ENST00000362931 109 ntBASIC3.25□□□□□ -1.89
MRE11P49959 RNU6-326P-201ENST00000365480 107 ntBASIC3.25□□□□□ -1.89
MRE11P49959 RNU6-20P-201ENST00000384106 107 ntBASIC3.25□□□□□ -1.89
MRE11P49959 SNORA7.4-201ENST00000384249 137 ntBASIC3.25□□□□□ -1.89
MRE11P49959 Y_RNA.570-201ENST00000384750 101 ntBASIC3.25□□□□□ -1.89
MRE11P49959 AC023141.4-201ENST00000412031 328 ntBASIC3.25□□□□□ -1.89
MRE11P49959 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.25□□□□□ -1.89
MRE11P49959 AL139132.1-201ENST00000431587 344 ntBASIC3.25□□□□□ -1.89
MRE11P49959 AL714022.1-201ENST00000439897 151 ntBASIC3.25□□□□□ -1.89
MRE11P49959 AL138752.1-201ENST00000452964 351 ntBASIC3.25□□□□□ -1.89
MRE11P49959 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.25□□□□□ -1.89
MRE11P49959 AC117440.1-201ENST00000474107 571 ntBASIC3.25□□□□□ -1.89
MRE11P49959 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.25□□□□□ -1.89
MRE11P49959 SNORA40.9-201ENST00000515895 93 ntBASIC3.25□□□□□ -1.89
MRE11P49959 SNORA31.16-201ENST00000516773 139 ntBASIC3.25□□□□□ -1.89
MRE11P49959 RNU7-110P-201ENST00000516891 62 ntBASIC3.25□□□□□ -1.89
MRE11P49959 RNU2-31P-201ENST00000516954 155 ntBASIC3.25□□□□□ -1.89
MRE11P49959 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
MRE11P49959 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRE11P49959 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
MRE11P49959 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.24□□□□□ -1.89
MRE11P49959 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRE11P49959 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
MRE11P49959 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
MRE11P49959 Y_RNA.83-201ENST00000363005 113 ntBASIC3.24□□□□□ -1.89
MRE11P49959 Y_RNA.150-201ENST00000363562 102 ntBASIC3.24□□□□□ -1.89
MRE11P49959 RNU6-873P-201ENST00000363833 107 ntBASIC3.24□□□□□ -1.89
MRE11P49959 Y_RNA.180-201ENST00000363867 113 ntBASIC3.24□□□□□ -1.89
MRE11P49959 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
MRE11P49959 RNU6-21P-201ENST00000384710 107 ntBASIC3.24□□□□□ -1.89
MRE11P49959 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
MRE11P49959 HMGN2P35-201ENST00000412164 270 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AC019205.3-201ENST00000424573 156 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AC009414.1-201ENST00000427200 443 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.24□□□□□ -1.89
MRE11P49959 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.24□□□□□ -1.89
MRE11P49959 RNA5SP54-201ENST00000516951 92 ntBASIC3.24□□□□□ -1.89
MRE11P49959 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.24□□□□□ -1.89
MRE11P49959 AC046143.2-201ENST00000609789 160 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AL357075.2-201ENST00000614906 189 ntBASIC3.24□□□□□ -1.89
MRE11P49959 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
MRE11P49959 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MRE11P49959 Y_RNA.569-201ENST00000384749 103 ntBASIC3.23□□□□□ -1.89
MRE11P49959 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MRE11P49959 RNU6-1140P-201ENST00000410517 106 ntBASIC3.23□□□□□ -1.89
MRE11P49959 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
MRE11P49959 AC112220.1-201ENST00000434628 355 ntBASIC3.23□□□□□ -1.89
MRE11P49959 RPS15AP5-201ENST00000436276 388 ntBASIC3.23□□□□□ -1.89
MRE11P49959 Z96811.1-201ENST00000445880 108 ntBASIC3.23□□□□□ -1.89
MRE11P49959 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.23□□□□□ -1.89
MRE11P49959 RPL36AP21-201ENST00000490372 323 ntBASIC3.23□□□□□ -1.89
MRE11P49959 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.23□□□□□ -1.89
MRE11P49959 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.23□□□□□ -1.89
MRE11P49959 SNORD53-201ENST00000579969 78 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms