Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
KCNC1P48547 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
KCNC1P48547 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNC1P48547 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNC1P48547 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNC1P48547 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNC1P48547 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNC1P48547 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNC1P48547 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNC1P48547 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 RNU5F-3P-201ENST00000363767 117 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 RNU6-324P-201ENST00000363957 106 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 RNU6-1280P-201ENST00000365211 107 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 MIR539-201ENST00000365690 78 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 RNU6-622P-201ENST00000384272 103 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 MIR490-201ENST00000384865 128 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 MIR34B-201ENST00000385076 84 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 PTGES3P4-201ENST00000426243 356 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNC1P48547 AC074290.1-201ENST00000448883 135 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 AC093663.1-201ENST00000497190 394 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNC1P48547 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNC1P48547 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNC1P48547 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 AC010329.5-201ENST00000623497 2174 ntBASIC3.24□□□□□ -1.89
KCNC1P48547 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
KCNC1P48547 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNC1P48547 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNC1P48547 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCNC1P48547 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.23□□□□□ -1.89
KCNC1P48547 MIR208A-201ENST00000362287 71 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 Y_RNA.24-201ENST00000362508 103 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 RNU6-103P-201ENST00000363686 107 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 RNA5SP387-201ENST00000364226 106 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 RNA5SP72-201ENST00000364442 117 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 Y_RNA.415-201ENST00000384012 112 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 RNU6-245P-201ENST00000384020 107 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 RNU6-460P-201ENST00000391158 108 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 BPY2DP-201ENST00000422208 265 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 AC092991.1-201ENST00000477176 376 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 YWHAEP4-201ENST00000505390 198 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.23□□□□□ -1.89
KCNC1P48547 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNC1P48547 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.23□□□□□ -1.89
KCNC1P48547 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNC1P48547 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.23□□□□□ -1.89
KCNC1P48547 AL391813.1-201ENST00000603098 260 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 AC069200.1-201ENST00000609511 323 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 ZNF702P-202ENST00000434269 1966 ntBASIC3.23□□□□□ -1.89
KCNC1P48547 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KCNC1P48547 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KCNC1P48547 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNC1P48547 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KCNC1P48547 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KCNC1P48547 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.22□□□□□ -1.89
KCNC1P48547 RNU6-834P-201ENST00000362367 110 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 RNU1-62P-201ENST00000362599 164 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 Y_RNA.293-201ENST00000364908 93 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 Y_RNA.563-201ENST00000384707 108 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 RNY4P18-201ENST00000391107 89 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KCNC1P48547 RNA5SP229-201ENST00000410809 99 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.22□□□□□ -1.89
KCNC1P48547 AC103975.1-201ENST00000482506 483 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.22□□□□□ -1.89
KCNC1P48547 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.22□□□□□ -1.89
KCNC1P48547 RNU6-561P-201ENST00000516222 102 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 AC090897.2-201ENST00000581715 130 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 AC006380.1-201ENST00000603598 186 ntBASIC3.22□□□□□ -1.89
KCNC1P48547 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.22□□□□□ -1.89
KCNC1P48547 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.22□□□□□ -1.89
KCNC1P48547 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
KCNC1P48547 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNC1P48547 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNC1P48547 RNU6-199P-201ENST00000362954 107 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 SNORD115-30-201ENST00000364117 82 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 Y_RNA.337-201ENST00000365312 102 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 SNORA72.4-201ENST00000384174 132 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 SNORA8.3-201ENST00000384679 139 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 RNU6-376P-201ENST00000384731 106 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 MT-TT-201ENST00000387460 66 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 RNA5SP354-201ENST00000391247 136 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 AC004866.1-201ENST00000411748 78 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 AC006461.1-201ENST00000412637 326 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 RNU7-107P-201ENST00000459121 61 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.21□□□□□ -1.9
KCNC1P48547 RNU6-1007P-201ENST00000516586 107 ntBASIC3.21□□□□□ -1.9
KCNC1P48547 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms