Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFRSF4P43489 AC104260.1-201ENST00000616660 539 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFRSF4P43489 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TNFRSF4P43489 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF4P43489 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
TNFRSF4P43489 Y_RNA.70-201ENST00000362886 110 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 Y_RNA.164-201ENST00000363709 102 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 SNORD31B-201ENST00000364977 69 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 U8.10-201ENST00000384260 133 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RNU6-842P-201ENST00000384269 107 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 Y_RNA.533-201ENST00000384596 114 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RNU6-1050P-201ENST00000410388 107 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RNU6-370P-201ENST00000411008 104 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 BTF3P4-201ENST00000418852 495 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 SNRPEP8-201ENST00000442866 260 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC079354.2-201ENST00000453523 154 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RNU1-131P-201ENST00000458943 161 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC087477.1-201ENST00000465747 340 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RPL7P42-201ENST00000481005 679 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RPS23P5-201ENST00000495419 428 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFRSF4P43489 Y_RNA.670-201ENST00000516255 105 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFRSF4P43489 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
TNFRSF4P43489 AC009229.3-201ENST00000608056 282 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 MIR1302-1-201ENST00000637932 143 ntBASIC1.75□□□□□ -2.13
TNFRSF4P43489 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF4P43489 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU6-661P-201ENST00000362409 107 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 Y_RNA.48-201ENST00000362710 103 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU1-76P-201ENST00000362903 159 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 SNORD114-6-201ENST00000364393 72 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 Y_RNA.356-201ENST00000365475 113 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU6-174P-201ENST00000410406 106 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU4-14P-201ENST00000410858 122 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNA5SP247-201ENST00000411181 105 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU6-1304P-201ENST00000411374 106 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 TOMM22P6-201ENST00000465035 409 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 AF186996.7-201ENST00000492781 209 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 AC026782.1-201ENST00000512952 449 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU6-559P-201ENST00000516151 98 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 ANP32BP3-201ENST00000559213 706 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 MIR3169-201ENST00000578032 83 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 7SK.7-201ENST00000603504 247 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 AC113139.1-201ENST00000605049 239 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFRSF4P43489 MTND4P1-201ENST00000457501 1466 ntBASIC1.74□□□□□ -2.13
TNFRSF4P43489 RNU5B-2P-201ENST00000363036 113 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 SNORA48.1-201ENST00000390879 135 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC139712.2-201ENST00000424302 339 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 RPL23AP50-201ENST00000434149 455 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 RPL23AP75-201ENST00000491601 451 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 RNU6-1213P-201ENST00000517075 94 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 CBX3P8-201ENST00000532412 525 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC005786.1-201ENST00000588553 154 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 RMST_6.1-201ENST00000611980 203 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 AC025253.1-201ENST00000613623 543 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 AL008636.1-201ENST00000625038 1018 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFRSF4P43489 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFRSF4P43489 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
TNFRSF4P43489 RNA5SP138-201ENST00000365098 114 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 RNU6-596P-201ENST00000365395 98 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 SNORA18.2-201ENST00000383865 132 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 Y_RNA.384-201ENST00000383909 102 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 Y_RNA.474-201ENST00000384341 102 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 Y_RNA.529-201ENST00000384586 119 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 MIR32-201ENST00000384965 70 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 SNORA75.4-201ENST00000391278 119 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 AL033519.2-201ENST00000403958 392 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 USMG5P1-201ENST00000425964 177 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 AC134698.4-201ENST00000523451 826 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFRSF4P43489 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.72□□□□□ -2.13
TNFRSF4P43489 SUB1P3-201ENST00000564581 315 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
TNFRSF4P43489 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms