Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 U3.9-201ENST00000363823 204 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 SNORD32B-201ENST00000364460 84 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 Y_RNA.535-201ENST00000384612 99 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-FP30511 MRPS18CP6-201ENST00000423587 223 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC092423.1-201ENST00000430165 186 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 RPL23AP7-203ENST00000449021 469 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 OR2AQ1P-201ENST00000451972 200 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC027575.1-201ENST00000481064 460 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC108210.2-201ENST00000503681 201 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC105758.1-201ENST00000506038 399 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-FP30511 RNU6-470P-201ENST00000515954 104 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC090517.1-201ENST00000569307 266 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 MIR5701-3-201ENST00000578890 82 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 AC005899.2-201ENST00000584353 90 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 MIR5701-1-201ENST00000585138 82 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 MIR5701-2-201ENST00000615634 82 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
HLA-FP30511 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-FP30511 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HLA-FP30511 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-FP30511 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
HLA-FP30511 RNY3P11-201ENST00000364153 102 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 Y_RNA.813-201ENST00000364639 102 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 Y_RNA.315-201ENST00000365117 102 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 MIR559-201ENST00000385188 96 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AC096920.1-201ENST00000423991 241 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 RNU7-87P-201ENST00000459343 62 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 RPL17P19-201ENST00000489069 552 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-FP30511 RNU7-175P-201ENST00000515915 61 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 DEFB131C-201ENST00000528817 165 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 EIF4A1P12-201ENST00000551910 141 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 UBL5P4-201ENST00000562584 236 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-FP30511 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AC005520.5-201ENST00000613926 164 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 AL359314.1-201ENST00000616913 261 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 MIR1248-201ENST00000629190 106 ntBASIC1.96□□□□□ -2.1
HLA-FP30511 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-FP30511 Y_RNA.106-201ENST00000363189 100 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 Y_RNA.146-201ENST00000363549 102 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 Y_RNA.187-201ENST00000363918 113 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 SNORA18.2-201ENST00000383865 132 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 RNU2-20P-201ENST00000410425 191 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 CYCSP49-201ENST00000420810 319 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-FP30511 RNU7-152P-201ENST00000458982 64 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 RN7SKP210-201ENST00000459176 261 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 AP000870.1-201ENST00000472927 406 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-FP30511 RNU6-307P-201ENST00000516743 106 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 RNU6-699P-201ENST00000517081 110 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 RNU6-264P-201ENST00000517134 104 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 AC004584.2-201ENST00000570407 410 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 7SK.7-201ENST00000603504 247 ntBASIC1.95□□□□□ -2.1
HLA-FP30511 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-FP30511 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-FP30511 ZNF204P-201ENST00000416749 2397 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-FP30511 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-FP30511 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-1040P-201ENST00000383974 107 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-17P-201ENST00000384245 107 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-18P-201ENST00000384527 107 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-700P-201ENST00000391043 107 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 AL512604.1-201ENST00000404812 257 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 MIR1262-201ENST00000408276 93 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-FP30511 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-FP30511 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 PRELID3BP1-201ENST00000457142 540 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 U8.22-201ENST00000459141 133 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-1098P-201ENST00000516772 96 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RNU6-58P-201ENST00000517143 103 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 AC027288.2-201ENST00000553028 243 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 AC104581.2-201ENST00000572227 430 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 RMST_6.1-201ENST00000611980 203 ntBASIC1.94□□□□□ -2.1
HLA-FP30511 AC133104.2-201ENST00000615272 193 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms