Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR3658-201ENST00000636291 56 ntBASIC3.96□□□□□ -1.78
RXRBP28702 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RXRBP28702 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RXRBP28702 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RXRBP28702 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RXRBP28702 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RXRBP28702 RNU6-859P-201ENST00000362728 107 ntBASIC3.95□□□□□ -1.78
RXRBP28702 MIR549A-201ENST00000385268 96 ntBASIC3.95□□□□□ -1.78
RXRBP28702 RNU6-763P-201ENST00000390865 106 ntBASIC3.95□□□□□ -1.78
RXRBP28702 AC009963.1-201ENST00000417265 157 ntBASIC3.95□□□□□ -1.78
RXRBP28702 SNRPGP7-201ENST00000469016 106 ntBASIC3.95□□□□□ -1.78
RXRBP28702 RNA5SP54-201ENST00000516951 92 ntBASIC3.95□□□□□ -1.78
RXRBP28702 AC107934.2-201ENST00000518653 310 ntBASIC3.95□□□□□ -1.78
RXRBP28702 AC107016.2-201ENST00000547968 190 ntBASIC3.95□□□□□ -1.78
RXRBP28702 AC012531.5-201ENST00000611375 151 ntBASIC3.95□□□□□ -1.78
RXRBP28702 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.95□□□□□ -1.78
RXRBP28702 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
RXRBP28702 AC096644.4-201ENST00000563417 2912 ntBASIC3.94□□□□□ -1.78
RXRBP28702 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RXRBP28702 RNU4-11P-201ENST00000365287 132 ntBASIC3.94□□□□□ -1.78
RXRBP28702 RNU1-73P-201ENST00000383971 164 ntBASIC3.94□□□□□ -1.78
RXRBP28702 SNORA20-201ENST00000384662 132 ntBASIC3.94□□□□□ -1.78
RXRBP28702 SNORA40.19-201ENST00000390846 128 ntBASIC3.94□□□□□ -1.78
RXRBP28702 RNU2-37P-201ENST00000410695 177 ntBASIC3.94□□□□□ -1.78
RXRBP28702 EBAG9P1-201ENST00000418955 543 ntBASIC3.94□□□□□ -1.78
RXRBP28702 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.94□□□□□ -1.78
RXRBP28702 AC078809.1-201ENST00000427601 140 ntBASIC3.94□□□□□ -1.78
RXRBP28702 AC091179.3-201ENST00000474761 144 ntBASIC3.94□□□□□ -1.78
RXRBP28702 SNORA25.12-201ENST00000516202 82 ntBASIC3.94□□□□□ -1.78
RXRBP28702 RNA5SP148-201ENST00000516527 94 ntBASIC3.94□□□□□ -1.78
RXRBP28702 AC112693.2-201ENST00000556538 232 ntBASIC3.94□□□□□ -1.78
RXRBP28702 MIR4431-201ENST00000579990 94 ntBASIC3.94□□□□□ -1.78
RXRBP28702 AL359881.1-201ENST00000602916 267 ntBASIC3.94□□□□□ -1.78
RXRBP28702 AC008873.1-201ENST00000625051 138 ntBASIC3.94□□□□□ -1.78
RXRBP28702 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RXRBP28702 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RXRBP28702 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
RXRBP28702 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.94□□□□□ -1.78
RXRBP28702 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
RXRBP28702 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RXRBP28702 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RXRBP28702 Y_RNA.40-201ENST00000362645 93 ntBASIC3.93□□□□□ -1.78
RXRBP28702 Y_RNA.179-201ENST00000363844 90 ntBASIC3.93□□□□□ -1.78
RXRBP28702 RNU6-801P-201ENST00000364087 105 ntBASIC3.93□□□□□ -1.78
RXRBP28702 snoU2_19.4-201ENST00000364329 80 ntBASIC3.93□□□□□ -1.78
RXRBP28702 Y_RNA.329-201ENST00000365209 107 ntBASIC3.93□□□□□ -1.78
RXRBP28702 SNORD6-201ENST00000365444 73 ntBASIC3.93□□□□□ -1.78
RXRBP28702 Y_RNA.498-201ENST00000384460 102 ntBASIC3.93□□□□□ -1.78
RXRBP28702 RPL26P27-201ENST00000414397 437 ntBASIC3.93□□□□□ -1.78
RXRBP28702 Z98742.3-201ENST00000418637 326 ntBASIC3.93□□□□□ -1.78
RXRBP28702 AC007215.1-201ENST00000464893 276 ntBASIC3.93□□□□□ -1.78
RXRBP28702 SNORA70.14-201ENST00000516205 110 ntBASIC3.93□□□□□ -1.78
RXRBP28702 CYCSP23-201ENST00000519781 313 ntBASIC3.93□□□□□ -1.78
RXRBP28702 AC022616.8-201ENST00000533569 253 ntBASIC3.93□□□□□ -1.78
RXRBP28702 AC021231.3-201ENST00000558497 370 ntBASIC3.93□□□□□ -1.78
RXRBP28702 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.93□□□□□ -1.78
RXRBP28702 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.93□□□□□ -1.78
RXRBP28702 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RXRBP28702 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.93□□□□□ -1.78
RXRBP28702 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RXRBP28702 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RXRBP28702 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RXRBP28702 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.92□□□□□ -1.78
RXRBP28702 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RXRBP28702 RNU6-600P-201ENST00000362524 99 ntBASIC3.92□□□□□ -1.78
RXRBP28702 RNU6-899P-201ENST00000363947 107 ntBASIC3.92□□□□□ -1.78
RXRBP28702 Y_RNA.338-201ENST00000365320 114 ntBASIC3.92□□□□□ -1.78
RXRBP28702 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
RXRBP28702 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.92□□□□□ -1.78
RXRBP28702 MIR1287-201ENST00000408492 90 ntBASIC3.92□□□□□ -1.78
RXRBP28702 AC012306.1-201ENST00000423267 114 ntBASIC3.92□□□□□ -1.78
RXRBP28702 AC244670.1-201ENST00000436879 112 ntBASIC3.92□□□□□ -1.78
RXRBP28702 CKS1BP2-201ENST00000497342 240 ntBASIC3.92□□□□□ -1.78
RXRBP28702 Y_RNA.797-201ENST00000515977 94 ntBASIC3.92□□□□□ -1.78
RXRBP28702 RNU6-436P-201ENST00000516171 114 ntBASIC3.92□□□□□ -1.78
RXRBP28702 RNU2-12P-201ENST00000517216 168 ntBASIC3.92□□□□□ -1.78
RXRBP28702 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.92□□□□□ -1.78
RXRBP28702 AL359198.2-201ENST00000611836 194 ntBASIC3.92□□□□□ -1.78
RXRBP28702 AL353997.5-201ENST00000618886 171 ntBASIC3.92□□□□□ -1.78
RXRBP28702 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.92□□□□□ -1.78
RXRBP28702 MIR3529-201ENST00000637713 78 ntBASIC3.92□□□□□ -1.78
RXRBP28702 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RXRBP28702 AC002546.1-201ENST00000588041 2504 ntBASIC3.92□□□□□ -1.78
RXRBP28702 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.92□□□□□ -1.78
RXRBP28702 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
RXRBP28702 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RXRBP28702 AC099654.7-201ENST00000635788 2127 ntBASIC3.91□□□□□ -1.78
RXRBP28702 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RXRBP28702 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RXRBP28702 AC092268.1-201ENST00000342691 405 ntBASIC3.91□□□□□ -1.78
RXRBP28702 Y_RNA.542-201ENST00000384641 111 ntBASIC3.91□□□□□ -1.78
RXRBP28702 RNU6-578P-201ENST00000390980 103 ntBASIC3.91□□□□□ -1.78
RXRBP28702 AL512633.1-201ENST00000399931 655 ntBASIC3.91□□□□□ -1.78
RXRBP28702 AC096649.2-201ENST00000416186 393 ntBASIC3.91□□□□□ -1.78
RXRBP28702 AC125238.1-201ENST00000448842 249 ntBASIC3.91□□□□□ -1.78
RXRBP28702 RNU7-197P-201ENST00000458836 62 ntBASIC3.91□□□□□ -1.78
RXRBP28702 RN7SKP282-201ENST00000516824 299 ntBASIC3.91□□□□□ -1.78
RXRBP28702 CKS1BP7-201ENST00000522230 235 ntBASIC3.91□□□□□ -1.78
RXRBP28702 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
RXRBP28702 MIR4648-201ENST00000580107 72 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms