Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC093331.1-201ENST00000521474 169 ntBASIC3.76□□□□□ -1.81
LMNB1P20700 DEFB117-201ENST00000602356 141 ntBASIC3.76□□□□□ -1.81
LMNB1P20700 Z83818.1-201ENST00000603584 150 ntBASIC3.76□□□□□ -1.81
LMNB1P20700 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMNB1P20700 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LMNB1P20700 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LMNB1P20700 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
LMNB1P20700 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMNB1P20700 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMNB1P20700 MIR30E-201ENST00000362104 92 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 RNU6-454P-201ENST00000364292 107 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 SNORA12-201ENST00000391162 147 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.75□□□□□ -1.81
LMNB1P20700 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.75□□□□□ -1.81
LMNB1P20700 EIF4A1P12-201ENST00000551910 141 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 SNRPGP20-201ENST00000604477 205 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 MIR7843-201ENST00000622274 79 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 MIR3674-201ENST00000636576 68 ntBASIC3.75□□□□□ -1.81
LMNB1P20700 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMNB1P20700 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.75□□□□□ -1.81
LMNB1P20700 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.74□□□□□ -1.81
LMNB1P20700 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
LMNB1P20700 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMNB1P20700 snoU2_19.1-201ENST00000362361 80 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 RNU6-1210P-201ENST00000363775 107 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 RNU6-923P-201ENST00000364753 107 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 SNORA18.2-201ENST00000383865 132 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 Y_RNA.464-201ENST00000384282 110 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 RNU1-57P-201ENST00000384491 166 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 SNORD67-201ENST00000390833 111 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 RNU6-918P-201ENST00000391219 106 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 RNU2-54P-201ENST00000410299 190 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 AC004386.2-201ENST00000441858 148 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 AL441985.1-201ENST00000457727 251 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 FAM35CP-201ENST00000554755 2470 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.74□□□□□ -1.81
LMNB1P20700 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.74□□□□□ -1.81
LMNB1P20700 AC005562.2-201ENST00000618264 111 ntBASIC3.74□□□□□ -1.81
LMNB1P20700 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.74□□□□□ -1.81
LMNB1P20700 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMNB1P20700 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.74□□□□□ -1.81
LMNB1P20700 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.74□□□□□ -1.81
LMNB1P20700 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMNB1P20700 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LMNB1P20700 AC092593.1-201ENST00000515413 1815 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMNB1P20700 RNU6-655P-201ENST00000362858 107 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 RNU6-1020P-201ENST00000363684 107 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 RNU6-187P-201ENST00000384139 106 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 SNORA70B-201ENST00000384210 135 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 AC009963.1-201ENST00000417265 157 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 NDUFB4P10-201ENST00000452541 359 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 AC006539.3-201ENST00000454258 129 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 RPS3P1-201ENST00000456781 192 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 AC010401.1-201ENST00000463867 348 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 RNU6-1212P-201ENST00000517023 104 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.73□□□□□ -1.81
LMNB1P20700 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.73□□□□□ -1.81
LMNB1P20700 MIR4769-201ENST00000584126 77 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LMNB1P20700 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.73□□□□□ -1.81
LMNB1P20700 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
LMNB1P20700 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMNB1P20700 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMNB1P20700 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMNB1P20700 RNU1-75P-201ENST00000347264 129 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 U3.9-201ENST00000363823 204 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AP002088.1-201ENST00000382740 395 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 Y_RNA.597-201ENST00000410463 100 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AC009414.1-201ENST00000427200 443 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.72□□□□□ -1.81
LMNB1P20700 RPL31P41-201ENST00000477967 372 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AC021205.2-201ENST00000480069 347 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 RPL36AP48-201ENST00000485521 314 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.72□□□□□ -1.81
LMNB1P20700 RNU6-406P-201ENST00000516470 107 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 RNU2-12P-201ENST00000517216 168 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AC079598.5-201ENST00000547460 117 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.72□□□□□ -1.81
LMNB1P20700 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.72□□□□□ -1.81
LMNB1P20700 snoU18.1-201ENST00000629629 71 ntBASIC3.72□□□□□ -1.81
LMNB1P20700 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMNB1P20700 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LMNB1P20700 RNU6-851P-201ENST00000384565 107 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 RNA5SP293-201ENST00000410527 113 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.71□□□□□ -1.82
LMNB1P20700 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 CENPBD1P1-201ENST00000464061 469 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 SCGB1D5P-201ENST00000515134 247 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.71□□□□□ -1.82
LMNB1P20700 MIR4308-201ENST00000580634 81 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.71□□□□□ -1.82
LMNB1P20700 MIR3133-201ENST00000583157 78 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.71□□□□□ -1.82
LMNB1P20700 AC099778.2-201ENST00000610904 211 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 TCL6_2.1-201ENST00000615162 119 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 AC073349.3-201ENST00000617616 186 ntBASIC3.71□□□□□ -1.82
LMNB1P20700 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.71□□□□□ -1.82
LMNB1P20700 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.7□□□□□ -1.82
LMNB1P20700 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms