Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 AL590002.1-201ENST00000406554 418 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DPA1P20036 RNU1-117P-201ENST00000517041 158 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 AC015720.1-201ENST00000565251 277 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DPA1P20036 DISC2.1-201ENST00000612827 205 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 AL078604.3-201ENST00000615580 211 ntBASIC1.49□□□□□ -2.17
HLA-DPA1P20036 Y_RNA.151-201ENST00000363566 112 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 Y_RNA.372-201ENST00000365599 102 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNU6-483P-201ENST00000384088 108 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 SNORA67.2-201ENST00000384300 149 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNU6-780P-201ENST00000391030 104 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPA1P20036 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DPA1P20036 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DPA1P20036 AC019235.1-201ENST00000503847 207 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNU6-344P-201ENST00000516635 111 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 Y_RNA.704-201ENST00000516851 102 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 RNA5SP54-201ENST00000516951 92 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 AC005668.1-201ENST00000571142 476 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 NBR2-204ENST00000587322 63 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
HLA-DPA1P20036 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DPA1P20036 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 SNORD50.1-201ENST00000362987 71 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 Y_RNA.287-201ENST00000364853 94 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 MIR194-1-201ENST00000384892 85 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HLA-DPA1P20036 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 SDAD1P3-201ENST00000427380 333 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DPA1P20036 PCMTD1P1-201ENST00000455560 355 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 Y_RNA.638-201ENST00000459374 113 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 RPS26P45-201ENST00000471748 340 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 HMGN1P12-201ENST00000499125 195 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DPA1P20036 ZNF519P2-201ENST00000557032 169 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 AC097065.2-201ENST00000608159 533 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 AC008873.1-201ENST00000625051 138 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 snoZ196.1-201ENST00000625269 89 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DPA1P20036 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
HLA-DPA1P20036 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU6-1252P-201ENST00000363054 104 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU6-534P-201ENST00000364877 106 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 MIR32-201ENST00000384965 70 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNA5SP467-201ENST00000391274 118 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU4-62P-201ENST00000410125 130 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU2-16P-201ENST00000410712 136 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 Y_RNA.615-201ENST00000410769 117 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 Z82205.1-201ENST00000428456 297 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 MTND1P29-201ENST00000448112 647 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RN7SKP210-201ENST00000459176 261 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 RNU7-34P-201ENST00000459394 64 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 Y_RNA.665-201ENST00000516177 98 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 PIGPP4-201ENST00000584447 307 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 AC006504.8-201ENST00000621046 635 ntBASIC1.46□□□□□ -2.18
HLA-DPA1P20036 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DPA1P20036 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 RNU6-245P-201ENST00000384020 107 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 SNORD116-2-201ENST00000384274 95 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 SNORD116-6-201ENST00000384711 96 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 RNU6-174P-201ENST00000410406 106 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 EIF1P1-201ENST00000421436 341 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 AL603825.1-201ENST00000438481 80 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 AC079354.2-201ENST00000453523 154 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 MTCO2P30-201ENST00000503662 364 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 RNU6-1198P-201ENST00000516904 67 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 MTND1P5-201ENST00000517906 940 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 POLR3GP2-201ENST00000588366 668 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 SNORD11B-201ENST00000607707 90 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 AC099654.12-201ENST00000639868 649 ntBASIC1.45□□□□□ -2.18
HLA-DPA1P20036 RNU4-9P-201ENST00000364951 139 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 RNU6-908P-201ENST00000410160 94 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AC016909.1-201ENST00000415916 166 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AC008134.1-201ENST00000420943 193 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPA1P20036 MTND1P1-201ENST00000445453 368 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AL163195.1-201ENST00000496941 348 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AC025647.1-201ENST00000517879 253 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms