Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC021231.3-201ENST00000558497 370 ntBASIC2.9□□□□□ -1.95
COL11A2P13942 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.9□□□□□ -1.95
COL11A2P13942 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
COL11A2P13942 BX322639.1-202ENST00000423987 2213 ntBASIC2.9□□□□□ -1.95
COL11A2P13942 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL11A2P13942 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A2P13942 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL11A2P13942 MIR410-201ENST00000362222 80 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RNU6-1020P-201ENST00000363684 107 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 Y_RNA.233-201ENST00000364407 101 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RNU6-926P-201ENST00000384075 107 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 Y_RNA.446-201ENST00000384178 104 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RNU6-1035P-201ENST00000384477 107 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 MIR888-201ENST00000401186 77 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
COL11A2P13942 AC078809.1-201ENST00000427601 140 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A2P13942 SNORD2.1-201ENST00000458762 69 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A2P13942 SNORA40.9-201ENST00000515895 93 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 SNORD116-28-201ENST00000516123 91 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RNU6-58P-201ENST00000517143 103 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A2P13942 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 AC006001.4-201ENST00000622243 395 ntBASIC2.89□□□□□ -1.95
COL11A2P13942 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A2P13942 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL11A2P13942 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 RNA5SP456-201ENST00000364002 114 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 RNU6-658P-201ENST00000384606 106 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.88□□□□□ -1.95
COL11A2P13942 HMGN2P30-201ENST00000423237 256 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.88□□□□□ -1.95
COL11A2P13942 AL590383.1-201ENST00000428602 75 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC005002.2-201ENST00000438228 269 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC007395.1-201ENST00000451333 677 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 RNU7-200P-201ENST00000516105 62 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC073349.3-201ENST00000617616 186 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COL11A2P13942 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL11A2P13942 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL11A2P13942 SNORA7.2-201ENST00000364446 145 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 RNU6-81P-201ENST00000365608 104 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 SNORA40.19-201ENST00000390846 128 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.88□□□□□ -1.95
COL11A2P13942 RNA5SP247-201ENST00000411181 105 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC024067.1-201ENST00000426199 223 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.88□□□□□ -1.95
COL11A2P13942 MRPS10P1-201ENST00000448483 130 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC005042.3-201ENST00000453230 174 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 AC016632.1-201ENST00000503994 196 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 RPL21P9-201ENST00000556149 474 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
COL11A2P13942 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A2P13942 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A2P13942 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
COL11A2P13942 AC009487.2-201ENST00000420969 6821 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
COL11A2P13942 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
COL11A2P13942 RNA5SP361-201ENST00000362686 118 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 Y_RNA.286-201ENST00000364813 102 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 Y_RNA.319-201ENST00000365138 92 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 Y_RNA.398-201ENST00000383952 99 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 Y_RNA.418-201ENST00000384029 102 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 RNU6-622P-201ENST00000384272 103 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 RNU2-61P-201ENST00000411069 191 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.87□□□□□ -1.95
COL11A2P13942 RPL21P66-201ENST00000426566 466 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 GPM6BP3-201ENST00000442797 145 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.87□□□□□ -1.95
COL11A2P13942 NACAP3-201ENST00000552100 481 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 AL391261.3-201ENST00000557194 520 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 MIR5695-201ENST00000579717 85 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 AL138963.2-201ENST00000605137 226 ntBASIC2.87□□□□□ -1.95
COL11A2P13942 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
COL11A2P13942 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.87□□□□□ -1.95
COL11A2P13942 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A2P13942 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A2P13942 SNORD56.1-201ENST00000362913 68 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 RNU6-1285P-201ENST00000363480 105 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL11A2P13942 TMSB4XP3-201ENST00000445144 114 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 HMGN2P21-201ENST00000447764 270 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 AC103975.1-201ENST00000482506 483 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 AC091874.1-201ENST00000511402 339 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A2P13942 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A2P13942 AC108706.1-201ENST00000611053 297 ntBASIC2.86□□□□□ -1.95
COL11A2P13942 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL11A2P13942 RNU5F-3P-201ENST00000363767 117 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNU6-873P-201ENST00000363833 107 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 Y_RNA.240-201ENST00000364469 95 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNU6-923P-201ENST00000364753 107 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 U8.10-201ENST00000384260 133 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNA5SP390-201ENST00000410191 113 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RPL30P12-201ENST00000474666 353 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms