Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.96□□□□□ -2.26
COL11A1P12107 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 AC107304.1-201ENST00000604229 296 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-85P-201ENST00000605989 107 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AL357078.3-201ENST00000607528 618 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC090517.2-201ENST00000614966 680 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC002553.4-201ENST00000616896 331 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
COL11A1P12107 RNU6-451P-201ENST00000362921 107 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 RNU6-522P-201ENST00000364497 107 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 MIR517A-201ENST00000385001 87 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 CBX3P9-201ENST00000402326 552 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 AC078809.1-201ENST00000427601 140 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.95□□□□□ -2.26
COL11A1P12107 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.95□□□□□ -2.26
COL11A1P12107 SNORD5.1-201ENST00000458800 75 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 RNU7-187P-201ENST00000458985 68 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 AP001324.2-201ENST00000461163 319 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 Y_RNA.665-201ENST00000516177 98 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 RNU2-53P-201ENST00000516257 147 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.95□□□□□ -2.26
COL11A1P12107 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.95□□□□□ -2.26
COL11A1P12107 TRAV32-201ENST00000553993 340 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 AC090517.1-201ENST00000569307 266 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 MIR5696-201ENST00000578474 85 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 CPDP1-201ENST00000579660 283 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL11A1P12107 AC006504.8-201ENST00000621046 635 ntBASIC0.95□□□□□ -2.26
COL11A1P12107 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
COL11A1P12107 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.95□□□□□ -2.26
COL11A1P12107 RNU6-845P-201ENST00000362578 103 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-1010P-201ENST00000362757 107 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-17P-201ENST00000384245 107 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-843P-201ENST00000384454 104 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-18P-201ENST00000384527 107 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL11A1P12107 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 MIR1262-201ENST00000408276 93 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 MIR1277-201ENST00000408536 78 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNA5SP201-201ENST00000410316 124 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 NCOR1P3-201ENST00000420479 303 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC082651.2-201ENST00000496833 166 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 AC025465.4-201ENST00000513422 638 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-970P-201ENST00000516312 107 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 SNORA40.12-201ENST00000516329 111 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 SNORA44.1-201ENST00000517031 108 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.94□□□□□ -2.26
COL11A1P12107 MIR3136-201ENST00000583498 78 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 RPL30P11-203ENST00000598995 310 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AL078605.1-201ENST00000603529 500 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC018889.1-201ENST00000605372 397 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 PRR13P7-201ENST00000605538 430 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RMST_3.1-201ENST00000611651 109 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC122108.2-201ENST00000611946 526 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.94□□□□□ -2.26
COL11A1P12107 MTND4P5-201ENST00000435821 1374 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL11A1P12107 SNORD32A-201ENST00000364805 84 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-827P-201ENST00000365553 106 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-784P-201ENST00000384330 106 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-908P-201ENST00000410160 94 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 Y_RNA.597-201ENST00000410463 100 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.94□□□□□ -2.26
COL11A1P12107 UBE2V1P4-201ENST00000425374 344 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 CBX3P6-201ENST00000430257 527 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 FGF7P6-202ENST00000451282 293 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.94□□□□□ -2.26
COL11A1P12107 AC069439.1-201ENST00000494739 167 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC021146.2-201ENST00000504736 556 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-358P-201ENST00000516564 75 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 MTND4LP26-201ENST00000518144 282 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 RNU6-323P-201ENST00000521915 107 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AF235103.2-201ENST00000525753 346 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC022616.8-201ENST00000533569 253 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.94□□□□□ -2.26
COL11A1P12107 SCOCP1-201ENST00000554676 349 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.94□□□□□ -2.26
COL11A1P12107 AC243960.4-201ENST00000600532 288 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AL022345.1-201ENST00000607292 135 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 AL078604.3-201ENST00000615580 211 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 MIR924-201ENST00000638017 53 ntBASIC0.94□□□□□ -2.26
COL11A1P12107 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL11A1P12107 RNU6-128P-201ENST00000383976 107 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 RNU6-378P-201ENST00000384324 107 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL11A1P12107 MIR936-201ENST00000401264 98 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AL133475.1-201ENST00000404414 305 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.93□□□□□ -2.26
COL11A1P12107 AL359672.1-201ENST00000442302 409 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.93□□□□□ -2.26
COL11A1P12107 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms