Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 RNU6-966P-201ENST00000516479 104 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
PABPC1P11940 AC018630.3-201ENST00000542637 96 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 AL512605.2-201ENST00000592972 256 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 AC023043.3-201ENST00000593113 385 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PABPC1P11940 Z82209.1-201ENST00000422141 2135 ntBASIC3.2□□□□□ -1.9
PABPC1P11940 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PABPC1P11940 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PABPC1P11940 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PABPC1P11940 Y_RNA.269-201ENST00000364685 89 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 RNU6-234P-201ENST00000365229 104 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 MT-TR-201ENST00000387439 65 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 MIR300-201ENST00000401138 83 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 FO393413.1-201ENST00000402892 195 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 SRIP1-201ENST00000489235 288 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 RNU2-12P-201ENST00000517216 168 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 AL162424.1-201ENST00000602325 221 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.19□□□□□ -1.9
PABPC1P11940 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PABPC1P11940 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PABPC1P11940 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
PABPC1P11940 RNU6-454P-201ENST00000364292 107 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 RNU6-740P-201ENST00000364734 105 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 RNU2-14P-201ENST00000411053 191 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 RPS29P26-201ENST00000477483 171 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.18□□□□□ -1.9
PABPC1P11940 SNORA27.4-201ENST00000516650 95 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
PABPC1P11940 RPL21P9-201ENST00000556149 474 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PABPC1P11940 MIR4643-201ENST00000577473 78 ntBASIC3.18□□□□□ -1.9
PABPC1P11940 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PABPC1P11940 RNU6-545P-201ENST00000362681 104 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 Y_RNA.275-201ENST00000364726 110 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 MIR548B-201ENST00000385247 97 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PABPC1P11940 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.17□□□□□ -1.9
PABPC1P11940 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.17□□□□□ -1.9
PABPC1P11940 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 AL161788.1-201ENST00000441805 169 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 AC074290.1-201ENST00000448883 135 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
PABPC1P11940 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.17□□□□□ -1.9
PABPC1P11940 RNU6-138P-201ENST00000515952 107 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 AC109329.2-201ENST00000519658 482 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
PABPC1P11940 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
PABPC1P11940 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
PABPC1P11940 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PABPC1P11940 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PABPC1P11940 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.16□□□□□ -1.9
PABPC1P11940 UBE2WP1-201ENST00000362030 340 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 SNORA71.1-201ENST00000364523 117 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 RNA5SP240-201ENST00000365355 128 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 RNU6-1248P-201ENST00000391096 64 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 U3.40-201ENST00000408706 208 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC009310.1-201ENST00000414414 451 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC024067.1-201ENST00000426199 223 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC114982.1-201ENST00000469402 321 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 HMGN2P9-201ENST00000476875 229 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 Y_RNA.700-201ENST00000516806 100 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC022080.3-201ENST00000544433 482 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 MIR4753-201ENST00000585119 83 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
PABPC1P11940 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
PABPC1P11940 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PABPC1P11940 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PABPC1P11940 RNU4-80P-201ENST00000363200 141 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 RNU6-324P-201ENST00000363957 106 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 RNU6-546P-201ENST00000383991 107 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PABPC1P11940 Y_RNA.590-201ENST00000410140 107 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 RNU2-63P-201ENST00000410792 194 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 AL139156.1-201ENST00000412785 841 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
PABPC1P11940 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.15□□□□□ -1.91
PABPC1P11940 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.15□□□□□ -1.91
PABPC1P11940 RNU6-436P-201ENST00000516171 114 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 Y_RNA.679-201ENST00000516416 91 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 AC130289.1-201ENST00000577321 73 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 MIR3145-201ENST00000580727 82 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 DEFB117-201ENST00000602356 141 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
PABPC1P11940 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms