Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL356583.2-201ENST00000426536 280 ntBASIC-1.9□□□□□ -2.71
TOP2AP11388 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.9□□□□□ -2.71
TOP2AP11388 MTCO2P7-201ENST00000446518 666 ntBASIC-1.9□□□□□ -2.71
TOP2AP11388 SCARNA18B-201ENST00000458806 135 ntBASIC-1.9□□□□□ -2.71
TOP2AP11388 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.9□□□□□ -2.71
TOP2AP11388 AL139286.2-201ENST00000606838 396 ntBASIC-1.9□□□□□ -2.71
TOP2AP11388 RNU6-444P-201ENST00000383988 108 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.91□□□□□ -2.71
TOP2AP11388 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.91□□□□□ -2.71
TOP2AP11388 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.91□□□□□ -2.71
TOP2AP11388 HSFY5P-201ENST00000453726 309 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 HMGN3P1-201ENST00000453847 193 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 MRPS36P5-201ENST00000551909 298 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 AC078795.2-201ENST00000602835 1252 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 SNORD38B-202ENST00000625943 69 ntBASIC-1.91□□□□□ -2.71
TOP2AP11388 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.91□□□□□ -2.71
TOP2AP11388 SNORA51.10-201ENST00000384418 136 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 AL117339.3-201ENST00000418733 162 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 AC006210.1-201ENST00000424882 111 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.91□□□□□ -2.72
TOP2AP11388 AL360271.2-201ENST00000447710 161 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 SNORA18.4-201ENST00000516440 124 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 VN1R83P-201ENST00000595685 445 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 AL390208.1-201ENST00000605885 644 ntBASIC-1.91□□□□□ -2.72
TOP2AP11388 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 Y_RNA.245-201ENST00000364493 95 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 RNU4-56P-201ENST00000364700 142 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 HLA-S-202ENST00000425174 53 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 LARP1BP3-201ENST00000437229 869 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 POLR2KP2-201ENST00000438155 177 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 C1DP5-201ENST00000525775 383 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 SNORA59B-202ENST00000578183 701 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 MIR4752-201ENST00000579672 72 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 AC090897.1-201ENST00000580909 226 ntBASIC-1.92□□□□□ -2.72
TOP2AP11388 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.92□□□□□ -2.72
TOP2AP11388 MTND5P17-201ENST00000418405 1603 ntBASIC-1.93□□□□□ -2.72
TOP2AP11388 RNA5SP467-201ENST00000391274 118 ntBASIC-1.93□□□□□ -2.72
TOP2AP11388 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.93□□□□□ -2.72
TOP2AP11388 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.93□□□□□ -2.72
TOP2AP11388 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.93□□□□□ -2.72
TOP2AP11388 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.93□□□□□ -2.72
TOP2AP11388 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.93□□□□□ -2.72
TOP2AP11388 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.93□□□□□ -2.72
TOP2AP11388 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.93□□□□□ -2.72
TOP2AP11388 AC134878.1-201ENST00000619901 243 ntBASIC-1.93□□□□□ -2.72
TOP2AP11388 AC092104.1-201ENST00000497346 1441 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 SNORA72.2-201ENST00000365028 127 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 ELOCP21-201ENST00000412558 336 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 MTCO3P41-201ENST00000414801 328 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 RNU1-29P-201ENST00000606574 126 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 AL450472.1-202ENST00000637286 180 ntBASIC-1.94□□□□□ -2.72
TOP2AP11388 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.94□□□□□ -2.72
TOP2AP11388 RNA5SP482-201ENST00000391269 118 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 AC010385.1-201ENST00000412374 256 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.95□□□□□ -2.72
TOP2AP11388 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.95□□□□□ -2.72
TOP2AP11388 SNORD111.1-201ENST00000516421 86 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 LRRC6P1-201ENST00000532188 885 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 AC138749.4-201ENST00000563970 127 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 AC138207.3-201ENST00000585289 166 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 AC005332.6-201ENST00000613178 446 ntBASIC-1.95□□□□□ -2.72
TOP2AP11388 SNORD115-42-201ENST00000364273 82 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 RNU6-934P-201ENST00000365154 107 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.96□□□□□ -2.72
TOP2AP11388 OR6C5P-201ENST00000452388 923 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 RNU6-438P-201ENST00000365561 103 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.96□□□□□ -2.72
TOP2AP11388 AC006366.1-201ENST00000422002 759 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 RPS24P1-201ENST00000438550 371 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 AP000870.1-201ENST00000472927 406 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.96□□□□□ -2.72
TOP2AP11388 AC021231.3-201ENST00000558497 370 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 AC109446.1-201ENST00000566172 220 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 AP003072.5-201ENST00000623872 773 ntBASIC-1.96□□□□□ -2.72
TOP2AP11388 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.97□□□□□ -2.73
TOP2AP11388 AL451054.2-201ENST00000420896 202 ntBASIC-1.97□□□□□ -2.73
TOP2AP11388 MTCO2P23-201ENST00000425216 680 ntBASIC-1.97□□□□□ -2.73
TOP2AP11388 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.97□□□□□ -2.73
TOP2AP11388 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.97□□□□□ -2.73
TOP2AP11388 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.97□□□□□ -2.73
TOP2AP11388 AC105081.1-201ENST00000617727 106 ntBASIC-1.97□□□□□ -2.73
TOP2AP11388 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.98□□□□□ -2.73
TOP2AP11388 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.98□□□□□ -2.73
TOP2AP11388 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.98□□□□□ -2.73
TOP2AP11388 RNU6-504P-201ENST00000516568 104 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 MIR5706-201ENST00000579841 80 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 FGF7P1-201ENST00000582820 288 ntBASIC-1.98□□□□□ -2.73
TOP2AP11388 snoZ40.1-201ENST00000364540 72 ntBASIC-1.99□□□□□ -2.73
TOP2AP11388 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.99□□□□□ -2.73
TOP2AP11388 MTATP6P26-201ENST00000445926 662 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms