Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6-1186P-201ENST00000410429 97 ntBASIC0.35□□□□□ -2.35
APOEP02649 MTND3P17-201ENST00000416968 344 ntBASIC0.35□□□□□ -2.35
APOEP02649 RNU7-128P-201ENST00000517247 62 ntBASIC0.35□□□□□ -2.35
APOEP02649 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.35□□□□□ -2.35
APOEP02649 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.35□□□□□ -2.35
APOEP02649 AC026470.2-201ENST00000561492 181 ntBASIC0.35□□□□□ -2.35
APOEP02649 MIR4509-3-201ENST00000578671 94 ntBASIC0.35□□□□□ -2.35
APOEP02649 MIR4775-201ENST00000581168 75 ntBASIC0.35□□□□□ -2.35
APOEP02649 MIR4509-2-201ENST00000583920 94 ntBASIC0.35□□□□□ -2.35
APOEP02649 AL360219.1-201ENST00000610230 366 ntBASIC0.35□□□□□ -2.35
APOEP02649 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.35□□□□□ -2.35
APOEP02649 MIR4509-1-201ENST00000618224 94 ntBASIC0.35□□□□□ -2.35
APOEP02649 AC007742.2-201ENST00000618226 398 ntBASIC0.35□□□□□ -2.35
APOEP02649 RNU6-266P-201ENST00000364225 107 ntBASIC0.34□□□□□ -2.36
APOEP02649 MIR586-201ENST00000385035 97 ntBASIC0.34□□□□□ -2.36
APOEP02649 RPS3AP3-201ENST00000411933 242 ntBASIC0.34□□□□□ -2.36
APOEP02649 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.34□□□□□ -2.36
APOEP02649 AL512286.1-201ENST00000439244 400 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.34□□□□□ -2.36
APOEP02649 USP9YP12-201ENST00000450481 570 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.34□□□□□ -2.36
APOEP02649 AC233266.1-201ENST00000454518 96 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC092436.3-201ENST00000511788 257 ntBASIC0.34□□□□□ -2.36
APOEP02649 RPL39P5-202ENST00000512505 151 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC027419.1-201ENST00000522976 328 ntBASIC0.34□□□□□ -2.36
APOEP02649 AGGF1P4-201ENST00000568249 801 ntBASIC0.34□□□□□ -2.36
APOEP02649 RSL24D1P11-201ENST00000591045 491 ntBASIC0.34□□□□□ -2.36
APOEP02649 AL357312.1-201ENST00000603879 298 ntBASIC0.34□□□□□ -2.36
APOEP02649 AP000907.4-201ENST00000604143 237 ntBASIC0.34□□□□□ -2.36
APOEP02649 AL158050.2-201ENST00000605336 568 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC242852.1-201ENST00000612151 96 ntBASIC0.34□□□□□ -2.36
APOEP02649 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
APOEP02649 MTND4P5-201ENST00000435821 1374 ntBASIC0.33□□□□□ -2.36
APOEP02649 U3.8-201ENST00000363675 217 ntBASIC0.33□□□□□ -2.36
APOEP02649 RNU6-1237P-201ENST00000384777 107 ntBASIC0.33□□□□□ -2.36
APOEP02649 MIR613-201ENST00000385248 95 ntBASIC0.33□□□□□ -2.36
APOEP02649 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
APOEP02649 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.33□□□□□ -2.36
APOEP02649 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.33□□□□□ -2.36
APOEP02649 AL606662.1-201ENST00000445763 553 ntBASIC0.33□□□□□ -2.36
APOEP02649 AC074290.1-201ENST00000448883 135 ntBASIC0.33□□□□□ -2.36
APOEP02649 RPS20P10-201ENST00000451209 253 ntBASIC0.33□□□□□ -2.36
APOEP02649 snoU13.25-201ENST00000458945 104 ntBASIC0.33□□□□□ -2.36
APOEP02649 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.33□□□□□ -2.36
APOEP02649 RNU2-46P-201ENST00000517038 113 ntBASIC0.33□□□□□ -2.36
APOEP02649 AC022878.1-201ENST00000530684 149 ntBASIC0.33□□□□□ -2.36
APOEP02649 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.33□□□□□ -2.36
APOEP02649 snoZ196.1-201ENST00000625269 89 ntBASIC0.33□□□□□ -2.36
APOEP02649 RNU6-1240P-201ENST00000365155 104 ntBASIC0.32□□□□□ -2.36
APOEP02649 RNU5E-5P-201ENST00000365379 116 ntBASIC0.32□□□□□ -2.36
APOEP02649 RNU6-1029P-201ENST00000384109 107 ntBASIC0.32□□□□□ -2.36
APOEP02649 RNU6-434P-201ENST00000384376 107 ntBASIC0.32□□□□□ -2.36
APOEP02649 MIR122-201ENST00000385044 85 ntBASIC0.32□□□□□ -2.36
APOEP02649 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
APOEP02649 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.32□□□□□ -2.36
APOEP02649 STAG3L5P-204ENST00000443759 179 ntBASIC0.32□□□□□ -2.36
APOEP02649 EPS15P1-201ENST00000448836 336 ntBASIC0.32□□□□□ -2.36
APOEP02649 AC093850.1-201ENST00000454121 251 ntBASIC0.32□□□□□ -2.36
APOEP02649 MTATP6P14-201ENST00000455189 673 ntBASIC0.32□□□□□ -2.36
APOEP02649 AC245047.8-201ENST00000456455 284 ntBASIC0.32□□□□□ -2.36
APOEP02649 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.32□□□□□ -2.36
APOEP02649 AC004584.2-201ENST00000570407 410 ntBASIC0.32□□□□□ -2.36
APOEP02649 RN7SL793P-201ENST00000583259 296 ntBASIC0.32□□□□□ -2.36
APOEP02649 AC018645.2-201ENST00000609151 472 ntBASIC0.32□□□□□ -2.36
APOEP02649 AL096861.1-201ENST00000610899 123 ntBASIC0.32□□□□□ -2.36
APOEP02649 MIR7111-201ENST00000619751 72 ntBASIC0.32□□□□□ -2.36
APOEP02649 Y_RNA.112-201ENST00000363250 102 ntBASIC0.31□□□□□ -2.36
APOEP02649 SNORA2.2-201ENST00000365473 135 ntBASIC0.31□□□□□ -2.36
APOEP02649 Y_RNA.393-201ENST00000383936 102 ntBASIC0.31□□□□□ -2.36
APOEP02649 RNU4-46P-201ENST00000410818 138 ntBASIC0.31□□□□□ -2.36
APOEP02649 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.31□□□□□ -2.36
APOEP02649 RPS29P15-201ENST00000458329 171 ntBASIC0.31□□□□□ -2.36
APOEP02649 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.31□□□□□ -2.36
APOEP02649 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
APOEP02649 RNU6-410P-201ENST00000517006 107 ntBASIC0.31□□□□□ -2.36
APOEP02649 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.31□□□□□ -2.36
APOEP02649 SUB1P2-201ENST00000556401 297 ntBASIC0.31□□□□□ -2.36
APOEP02649 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
APOEP02649 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.31□□□□□ -2.36
APOEP02649 AC068792.1-201ENST00000621354 417 ntBASIC0.31□□□□□ -2.36
APOEP02649 7SK.10-201ENST00000621414 298 ntBASIC0.31□□□□□ -2.36
APOEP02649 AC006927.3-201ENST00000638789 384 ntBASIC0.31□□□□□ -2.36
APOEP02649 RNU6-74P-201ENST00000384235 107 ntBASIC0.3□□□□□ -2.36
APOEP02649 SNORA67.2-201ENST00000384300 149 ntBASIC0.3□□□□□ -2.36
APOEP02649 RNU6-1127P-201ENST00000384580 107 ntBASIC0.3□□□□□ -2.36
APOEP02649 MIR454-201ENST00000390180 115 ntBASIC0.3□□□□□ -2.36
APOEP02649 AC008134.1-201ENST00000420943 193 ntBASIC0.3□□□□□ -2.36
APOEP02649 CALM2P4-201ENST00000430810 426 ntBASIC0.3□□□□□ -2.36
APOEP02649 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.3□□□□□ -2.36
APOEP02649 TPT1P7-201ENST00000458300 517 ntBASIC0.3□□□□□ -2.36
APOEP02649 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
APOEP02649 Vault.3-201ENST00000516676 95 ntBASIC0.3□□□□□ -2.36
APOEP02649 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.3□□□□□ -2.36
APOEP02649 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.3□□□□□ -2.36
APOEP02649 AL162424.1-201ENST00000602325 221 ntBASIC0.3□□□□□ -2.36
APOEP02649 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
APOEP02649 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
APOEP02649 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
APOEP02649 AL355143.1-201ENST00000407101 841 ntBASIC0.29□□□□□ -2.36
APOEP02649 AL354692.1-201ENST00000423044 315 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms