Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL031274.1-201ENST00000450334 232 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RNU6-956P-201ENST00000458868 103 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RNU7-63P-201ENST00000459054 62 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RPL23AP75-201ENST00000491601 451 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.73□□□□□ -2.29
COL4A1P02462 AC005741.1-201ENST00000511094 432 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RN7SKP298-201ENST00000515950 94 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 CENPUP1-201ENST00000526649 1202 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A1P02462 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A1P02462 AC068790.2-201ENST00000602601 557 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 HSPE1P19-201ENST00000603327 295 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 AL034555.1-201ENST00000604816 211 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RPL17P51-201ENST00000605218 238 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RNU6-89P-201ENST00000606519 100 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 AC064807.4-201ENST00000607201 407 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 AC104458.1-201ENST00000608243 463 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
COL4A1P02462 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
COL4A1P02462 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.73□□□□□ -2.29
COL4A1P02462 U3.9-201ENST00000363823 204 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-266P-201ENST00000364225 107 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 SNORD32B-201ENST00000364460 84 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 Y_RNA.409-201ENST00000383990 98 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-1042P-201ENST00000384204 107 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 Y_RNA.504-201ENST00000384481 104 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-332P-201ENST00000391193 108 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AL353193.1-201ENST00000421444 268 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A1P02462 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 SNRPEP8-201ENST00000442866 260 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC130509.1-201ENST00000464158 433 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 SRRM1P2-201ENST00000464531 1192 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC010424.1-201ENST00000506336 297 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-1038P-201ENST00000516516 104 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 SNORD60.2-201ENST00000516883 86 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A1P02462 AP003034.1-201ENST00000534621 422 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AGGF1P4-201ENST00000568249 801 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 MIR5094-201ENST00000578766 85 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 MIR4424-201ENST00000585257 86 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A1P02462 AL355802.3-201ENST00000607571 545 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-112P-201ENST00000363599 104 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-1019P-201ENST00000364424 107 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 SNORD31B-201ENST00000364977 69 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 Y_RNA.378-201ENST00000365652 113 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-38P-201ENST00000384085 107 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.72□□□□□ -2.29
COL4A1P02462 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.72□□□□□ -2.29
COL4A1P02462 MTCO1P21-201ENST00000416634 589 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL4A1P02462 MRPL35P3-201ENST00000421557 364 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC060773.1-201ENST00000421698 310 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 EIF4EP2-201ENST00000422816 654 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC073464.1-201ENST00000429823 534 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A1P02462 AL606489.2-201ENST00000433886 234 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A1P02462 RNU1-131P-201ENST00000458943 161 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A1P02462 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A1P02462 RPL39P5-202ENST00000512505 151 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 RNU6-496P-201ENST00000516145 99 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.72□□□□□ -2.29
COL4A1P02462 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A1P02462 MIR4422-201ENST00000581938 83 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 MIR5692C1-201ENST00000585309 91 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC110760.3-201ENST00000598794 467 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC009994.1-201ENST00000606889 253 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 AC243829.3-201ENST00000622177 108 ntBASIC0.72□□□□□ -2.29
COL4A1P02462 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL4A1P02462 AC073544.1-201ENST00000600110 1595 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 Y_RNA.280-201ENST00000364765 112 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 Y_RNA.303-201ENST00000364998 94 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 Y_RNA.412-201ENST00000384001 104 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 RNU6-214P-201ENST00000384130 107 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 RNU6-541P-201ENST00000384709 110 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 MIR597-201ENST00000384968 97 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
COL4A1P02462 RNU6-1093P-201ENST00000391194 107 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
COL4A1P02462 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.71□□□□□ -2.3
COL4A1P02462 C8orf59P1-201ENST00000429930 303 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC099677.2-201ENST00000436385 175 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.71□□□□□ -2.3
COL4A1P02462 AC073415.1-201ENST00000449240 153 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 RPS3AP17-201ENST00000472594 777 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC025465.4-201ENST00000513422 638 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 RNU6-430P-201ENST00000517078 107 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC026407.1-201ENST00000518369 204 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms