Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.93□□□□□ -2.26
SNX4O95219 MIR5583-1-201ENST00000580941 59 ntBASIC0.93□□□□□ -2.26
SNX4O95219 AL390123.1-201ENST00000603216 237 ntBASIC0.93□□□□□ -2.26
SNX4O95219 MIR6504-201ENST00000613520 61 ntBASIC0.93□□□□□ -2.26
SNX4O95219 SNORD3E-202ENST00000627253 216 ntBASIC0.93□□□□□ -2.26
SNX4O95219 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.93□□□□□ -2.26
SNX4O95219 Y_RNA.123-201ENST00000363338 102 ntBASIC0.92□□□□□ -2.26
SNX4O95219 MIR499A-201ENST00000384903 122 ntBASIC0.92□□□□□ -2.26
SNX4O95219 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.92□□□□□ -2.26
SNX4O95219 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.92□□□□□ -2.26
SNX4O95219 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
SNX4O95219 MTCO2P11-201ENST00000431069 680 ntBASIC0.92□□□□□ -2.26
SNX4O95219 AC105758.1-201ENST00000506038 399 ntBASIC0.92□□□□□ -2.26
SNX4O95219 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.92□□□□□ -2.26
SNX4O95219 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.92□□□□□ -2.26
SNX4O95219 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SNX4O95219 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.92□□□□□ -2.26
SNX4O95219 AC008088.1-201ENST00000580993 280 ntBASIC0.92□□□□□ -2.26
SNX4O95219 AC004223.2-201ENST00000590309 544 ntBASIC0.92□□□□□ -2.26
SNX4O95219 AC022217.4-201ENST00000604389 163 ntBASIC0.92□□□□□ -2.26
SNX4O95219 AL360219.1-201ENST00000610230 366 ntBASIC0.92□□□□□ -2.26
SNX4O95219 HULC.1-201ENST00000612720 240 ntBASIC0.92□□□□□ -2.26
SNX4O95219 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SNX4O95219 Y_RNA.238-201ENST00000364441 102 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
SNX4O95219 SNORA72.3-201ENST00000365074 132 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU6-996P-201ENST00000365438 107 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU6-440P-201ENST00000390882 105 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.91□□□□□ -2.26
SNX4O95219 AC016909.1-201ENST00000415916 166 ntBASIC0.91□□□□□ -2.26
SNX4O95219 MTND2P18-201ENST00000419962 1030 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU7-94P-201ENST00000459576 63 ntBASIC0.91□□□□□ -2.26
SNX4O95219 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
SNX4O95219 SCOCP1-201ENST00000554676 349 ntBASIC0.91□□□□□ -2.26
SNX4O95219 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
SNX4O95219 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
SNX4O95219 AC073349.3-201ENST00000617616 186 ntBASIC0.91□□□□□ -2.26
SNX4O95219 AC139792.3-201ENST00000623525 224 ntBASIC0.91□□□□□ -2.26
SNX4O95219 SCARNA4-201ENST00000629045 128 ntBASIC0.91□□□□□ -2.26
SNX4O95219 U6.108-201ENST00000637764 58 ntBASIC0.91□□□□□ -2.26
SNX4O95219 RNU4-76P-201ENST00000364509 141 ntBASIC0.9□□□□□ -2.27
SNX4O95219 SNORA67.2-201ENST00000384300 149 ntBASIC0.9□□□□□ -2.27
SNX4O95219 RNU6-505P-201ENST00000384427 107 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AL606923.1-201ENST00000406616 190 ntBASIC0.9□□□□□ -2.27
SNX4O95219 MTCYBP8-201ENST00000422855 651 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC245047.7-201ENST00000440265 293 ntBASIC0.9□□□□□ -2.27
SNX4O95219 MTND1P27-201ENST00000451117 902 ntBASIC0.9□□□□□ -2.27
SNX4O95219 MTCO3P38-201ENST00000468910 766 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC048334.1-201ENST00000477975 159 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC103851.1-201ENST00000506833 274 ntBASIC0.9□□□□□ -2.27
SNX4O95219 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
SNX4O95219 RNU6-189P-201ENST00000516120 101 ntBASIC0.9□□□□□ -2.27
SNX4O95219 RNA5SP168-201ENST00000516642 112 ntBASIC0.9□□□□□ -2.27
SNX4O95219 RN7SKP49-201ENST00000516675 260 ntBASIC0.9□□□□□ -2.27
SNX4O95219 RNU6-922P-201ENST00000516753 99 ntBASIC0.9□□□□□ -2.27
SNX4O95219 MRPS36P4-201ENST00000534436 298 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC025423.5-201ENST00000550230 219 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AL137100.2-201ENST00000555786 315 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC068790.6-201ENST00000602558 258 ntBASIC0.9□□□□□ -2.27
SNX4O95219 AC136443.5-201ENST00000603741 370 ntBASIC0.9□□□□□ -2.27
SNX4O95219 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
SNX4O95219 RNU6-1317P-201ENST00000364582 104 ntBASIC0.89□□□□□ -2.27
SNX4O95219 RNU6-1329P-201ENST00000365664 107 ntBASIC0.89□□□□□ -2.27
SNX4O95219 MIR660-201ENST00000385235 97 ntBASIC0.89□□□□□ -2.27
SNX4O95219 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.89□□□□□ -2.27
SNX4O95219 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
SNX4O95219 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.89□□□□□ -2.27
SNX4O95219 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.89□□□□□ -2.27
SNX4O95219 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
SNX4O95219 AL136370.1-201ENST00000608166 691 ntBASIC0.89□□□□□ -2.27
SNX4O95219 AC064836.2-201ENST00000609491 462 ntBASIC0.89□□□□□ -2.27
SNX4O95219 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
SNX4O95219 FER-210ENST00000628534 558 ntTSL 5 BASIC0.89□□□□□ -2.27
SNX4O95219 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.89□□□□□ -2.27
SNX4O95219 OR4G1P-203ENST00000641984 1631 ntBASIC0.89□□□□□ -2.27
SNX4O95219 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SNX4O95219 RNU6-82P-201ENST00000363970 107 ntBASIC0.88□□□□□ -2.27
SNX4O95219 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
SNX4O95219 SNORA26.8-201ENST00000391306 124 ntBASIC0.88□□□□□ -2.27
SNX4O95219 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SNX4O95219 AC073415.1-201ENST00000449240 153 ntBASIC0.88□□□□□ -2.27
SNX4O95219 MTCO2P18-201ENST00000457151 658 ntBASIC0.88□□□□□ -2.27
SNX4O95219 SNORD79.1-201ENST00000516069 84 ntBASIC0.88□□□□□ -2.27
SNX4O95219 RNA5SP54-201ENST00000516951 92 ntBASIC0.88□□□□□ -2.27
SNX4O95219 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.88□□□□□ -2.27
SNX4O95219 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SNX4O95219 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.88□□□□□ -2.27
SNX4O95219 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.88□□□□□ -2.27
SNX4O95219 SNORD11B-201ENST00000607707 90 ntBASIC0.88□□□□□ -2.27
SNX4O95219 RMST_3.1-201ENST00000611651 109 ntBASIC0.88□□□□□ -2.27
SNX4O95219 AC106754.2-201ENST00000623006 233 ntBASIC0.88□□□□□ -2.27
SNX4O95219 OR5AK4P-201ENST00000635912 903 ntBASIC0.88□□□□□ -2.27
SNX4O95219 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
SNX4O95219 RNU6-245P-201ENST00000384020 107 ntBASIC0.87□□□□□ -2.27
SNX4O95219 RNU5A-6P-201ENST00000384136 116 ntBASIC0.87□□□□□ -2.27
SNX4O95219 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AL049545.1-201ENST00000401856 572 ntBASIC0.87□□□□□ -2.27
SNX4O95219 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.87□□□□□ -2.27
SNX4O95219 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.87□□□□□ -2.27
SNX4O95219 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms