Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 AL117187.1-201ENST00000555482 181 ntBASIC2.65□□□□□ -1.99
SNX2O60749 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
SNX2O60749 AC026271.5-201ENST00000577873 130 ntBASIC2.65□□□□□ -1.99
SNX2O60749 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.65□□□□□ -1.99
SNX2O60749 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
SNX2O60749 AL357075.2-201ENST00000614906 189 ntBASIC2.65□□□□□ -1.99
SNX2O60749 AC005562.2-201ENST00000618264 111 ntBASIC2.65□□□□□ -1.99
SNX2O60749 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNX2O60749 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNX2O60749 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
SNX2O60749 RNU1-76P-201ENST00000362903 159 ntBASIC2.64□□□□□ -1.99
SNX2O60749 RNU1-23P-201ENST00000363361 144 ntBASIC2.64□□□□□ -1.99
SNX2O60749 RNU6-727P-201ENST00000363592 107 ntBASIC2.64□□□□□ -1.99
SNX2O60749 RNU6-280P-201ENST00000364145 104 ntBASIC2.64□□□□□ -1.99
SNX2O60749 Y_RNA.380-201ENST00000365663 111 ntBASIC2.64□□□□□ -1.99
SNX2O60749 RNU6-1145P-201ENST00000384246 107 ntBASIC2.64□□□□□ -1.99
SNX2O60749 Y_RNA.526-201ENST00000384572 110 ntBASIC2.64□□□□□ -1.99
SNX2O60749 SNORA40.19-201ENST00000390846 128 ntBASIC2.64□□□□□ -1.99
SNX2O60749 SNORD12B-201ENST00000410433 91 ntBASIC2.64□□□□□ -1.99
SNX2O60749 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX2O60749 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.64□□□□□ -1.99
SNX2O60749 MRPS35P2-201ENST00000508242 191 ntBASIC2.64□□□□□ -1.99
SNX2O60749 RNU2-44P-201ENST00000516795 194 ntBASIC2.64□□□□□ -1.99
SNX2O60749 NDUFA5P6-201ENST00000542110 379 ntBASIC2.64□□□□□ -1.99
SNX2O60749 MIR4659A-201ENST00000580269 81 ntBASIC2.64□□□□□ -1.99
SNX2O60749 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
SNX2O60749 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
SNX2O60749 AL355297.3-201ENST00000604082 446 ntBASIC2.64□□□□□ -1.99
SNX2O60749 AC010999.1-201ENST00000611856 324 ntBASIC2.64□□□□□ -1.99
SNX2O60749 AC240442.1-201ENST00000616055 283 ntBASIC2.64□□□□□ -1.99
SNX2O60749 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SNX2O60749 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNX2O60749 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.63□□□□□ -1.99
SNX2O60749 Y_RNA.214-201ENST00000364201 112 ntBASIC2.63□□□□□ -1.99
SNX2O60749 ELOCP20-201ENST00000422460 345 ntBASIC2.63□□□□□ -1.99
SNX2O60749 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX2O60749 MTND3P2-201ENST00000438452 342 ntBASIC2.63□□□□□ -1.99
SNX2O60749 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.63□□□□□ -1.99
SNX2O60749 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.63□□□□□ -1.99
SNX2O60749 RN7SKP49-201ENST00000516675 260 ntBASIC2.63□□□□□ -1.99
SNX2O60749 RNU6-965P-201ENST00000516721 96 ntBASIC2.63□□□□□ -1.99
SNX2O60749 AC018630.3-201ENST00000542637 96 ntBASIC2.63□□□□□ -1.99
SNX2O60749 AC008269.2-201ENST00000561915 1105 ntBASIC2.63□□□□□ -1.99
SNX2O60749 SNRPGP20-201ENST00000604477 205 ntBASIC2.63□□□□□ -1.99
SNX2O60749 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.63□□□□□ -1.99
SNX2O60749 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNX2O60749 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.63□□□□□ -1.99
SNX2O60749 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SNX2O60749 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SNX2O60749 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SNX2O60749 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SNX2O60749 Y_RNA.26-201ENST00000362539 101 ntBASIC2.62□□□□□ -1.99
SNX2O60749 Y_RNA.179-201ENST00000363844 90 ntBASIC2.62□□□□□ -1.99
SNX2O60749 RNU6-546P-201ENST00000383991 107 ntBASIC2.62□□□□□ -1.99
SNX2O60749 RNU6-245P-201ENST00000384020 107 ntBASIC2.62□□□□□ -1.99
SNX2O60749 MIR568-201ENST00000385036 95 ntBASIC2.62□□□□□ -1.99
SNX2O60749 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
SNX2O60749 SNORD23.1-201ENST00000408212 104 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX2O60749 SDAD1P3-201ENST00000427380 333 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
SNX2O60749 RNU6-1098P-201ENST00000516772 96 ntBASIC2.62□□□□□ -1.99
SNX2O60749 RNU6-897P-201ENST00000517135 105 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX2O60749 RRN3P3-201ENST00000549207 578 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AC026470.2-201ENST00000561492 181 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX2O60749 MIR5006-201ENST00000583027 110 ntBASIC2.62□□□□□ -1.99
SNX2O60749 AL121655.1-201ENST00000605811 308 ntBASIC2.62□□□□□ -1.99
SNX2O60749 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
SNX2O60749 TCL6_2.1-201ENST00000615162 119 ntBASIC2.62□□□□□ -1.99
SNX2O60749 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX2O60749 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SNX2O60749 MTND5P35-201ENST00000557537 1720 ntBASIC2.62□□□□□ -1.99
SNX2O60749 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
SNX2O60749 RNU6-806P-201ENST00000365147 105 ntBASIC2.61□□□□□ -1.99
SNX2O60749 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.61□□□□□ -1.99
SNX2O60749 RNU6-793P-201ENST00000384233 104 ntBASIC2.61□□□□□ -1.99
SNX2O60749 Y_RNA.512-201ENST00000384518 102 ntBASIC2.61□□□□□ -1.99
SNX2O60749 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
SNX2O60749 SNORD78.2-201ENST00000391076 69 ntBASIC2.61□□□□□ -1.99
SNX2O60749 AL079342.1-201ENST00000401460 267 ntBASIC2.61□□□□□ -1.99
SNX2O60749 MIR1294-201ENST00000408503 142 ntBASIC2.61□□□□□ -1.99
SNX2O60749 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX2O60749 CBX3P6-201ENST00000430257 527 ntBASIC2.61□□□□□ -1.99
SNX2O60749 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
SNX2O60749 AC067942.3-201ENST00000512025 362 ntBASIC2.61□□□□□ -1.99
SNX2O60749 RPL23AP94-201ENST00000512518 302 ntBASIC2.61□□□□□ -1.99
SNX2O60749 RNU6-635P-201ENST00000516651 102 ntBASIC2.61□□□□□ -1.99
SNX2O60749 AC012640.5-201ENST00000623897 319 ntBASIC2.61□□□□□ -1.99
SNX2O60749 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SNX2O60749 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNX2O60749 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SNX2O60749 RNU1-62P-201ENST00000362599 164 ntBASIC2.6□□□□□ -1.99
SNX2O60749 Y_RNA.105-201ENST00000363182 111 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNU6-238P-201ENST00000363313 106 ntBASIC2.6□□□□□ -1.99
SNX2O60749 SNORA63.7-201ENST00000365579 123 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNU6-611P-201ENST00000384276 104 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RPL21P1-201ENST00000399532 476 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms