Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.21□□□□□ -2.06
ZIC3O60481 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.21□□□□□ -2.06
ZIC3O60481 SDAD1P3-201ENST00000427380 333 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RPS23P5-201ENST00000495419 428 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.21□□□□□ -2.06
ZIC3O60481 RNU6-1045P-201ENST00000516321 107 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RNU5F-4P-201ENST00000516581 114 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 Y_RNA.720-201ENST00000517166 92 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 MTND5P35-201ENST00000557537 1720 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.21□□□□□ -2.06
ZIC3O60481 AC008737.2-201ENST00000599446 118 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AL390123.1-201ENST00000603216 237 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AL121655.1-201ENST00000605811 308 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.21□□□□□ -2.06
ZIC3O60481 AL357075.2-201ENST00000614906 189 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AC010205.1-201ENST00000616668 449 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 AL078596.1-201ENST00000624856 447 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ZIC3O60481 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ZIC3O60481 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ZIC3O60481 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ZIC3O60481 SNORA63.7-201ENST00000365579 123 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 Y_RNA.458-201ENST00000384240 102 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 SNORD78.2-201ENST00000391076 69 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 RPEP5-201ENST00000441137 268 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 ATP5EP1-201ENST00000510257 156 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.2□□□□□ -2.06
ZIC3O60481 AC004486.1-201ENST00000546846 233 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.2□□□□□ -2.06
ZIC3O60481 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.2□□□□□ -2.06
ZIC3O60481 MIR3670-2-201ENST00000582974 65 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 MIR3670-1-201ENST00000584160 65 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 MIR3670-3-201ENST00000584855 65 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 AL021879.1-201ENST00000611756 288 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 MIR3670-4-201ENST00000612260 65 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 AC240442.1-201ENST00000616055 283 ntBASIC2.2□□□□□ -2.06
ZIC3O60481 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZIC3O60481 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
ZIC3O60481 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.2□□□□□ -2.06
ZIC3O60481 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZIC3O60481 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RNU6-727P-201ENST00000363592 107 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 SNORA25B-201ENST00000365507 128 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AL033519.2-201ENST00000403958 392 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AL139095.1-201ENST00000404326 391 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 Y_RNA.595-201ENST00000410403 105 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RNU6-130P-201ENST00000411112 103 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 FCF1P4-201ENST00000448326 183 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 MTND5P22-201ENST00000458380 195 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RNU7-26P-201ENST00000458980 63 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RNU7-14P-201ENST00000459331 62 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RPL26P26-201ENST00000480251 434 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RN7SL636P-201ENST00000497504 294 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AC067942.3-201ENST00000512025 362 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 SNORA40.9-201ENST00000515895 93 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 CYCSP23-201ENST00000519781 313 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 RRN3P3-201ENST00000549207 578 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 MIR4659A-201ENST00000580269 81 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AC136443.5-201ENST00000603741 370 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AL355297.3-201ENST00000604082 446 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 SNORD11B-201ENST00000607707 90 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 AC011476.5-201ENST00000615594 130 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.19□□□□□ -2.06
ZIC3O60481 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
ZIC3O60481 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.19□□□□□ -2.06
ZIC3O60481 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC3O60481 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZIC3O60481 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ZIC3O60481 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 Y_RNA.415-201ENST00000384012 112 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 RNU6-926P-201ENST00000384075 107 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 RNU6-611P-201ENST00000384276 104 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 Y_RNA.471-201ENST00000384312 102 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ZIC3O60481 MRPL35P1-201ENST00000404272 572 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
ZIC3O60481 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC3O60481 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.18□□□□□ -2.06
ZIC3O60481 HMGN2P18-201ENST00000450680 270 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 PCNPP5-201ENST00000452246 481 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC010655.3-201ENST00000478818 450 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC074133.1-201ENST00000515696 183 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 RNU6-1046P-201ENST00000516538 107 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AK6P2-201ENST00000549020 471 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 RAC1P9-201ENST00000604990 392 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC008873.1-201ENST00000625051 138 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 AC068205.3-201ENST00000636385 468 ntBASIC2.18□□□□□ -2.06
ZIC3O60481 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZIC3O60481 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZIC3O60481 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 RNU6-545P-201ENST00000362681 104 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms