Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RN7SKP284-201ENST00000411002 343 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 HMGN2P31-201ENST00000432430 273 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 SNORD11-201ENST00000459124 84 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 RPL27AP5-201ENST00000469428 449 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 RPS27P22-201ENST00000478056 241 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 RN7SL323P-201ENST00000494712 295 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 AC109329.2-201ENST00000519658 482 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA2O43364 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
HOXA2O43364 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA2O43364 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA2O43364 MTND5P18-201ENST00000445624 1801 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA2O43364 RNU6-508P-201ENST00000363231 103 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 SNORD31B-201ENST00000364977 69 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 RNY4P30-201ENST00000410216 95 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA2O43364 RNA5SP179-201ENST00000517284 121 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 AC025647.1-201ENST00000517879 253 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 AC100770.1-201ENST00000532310 322 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 AC103810.1-201ENST00000579873 453 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 SNORA51-201ENST00000606420 132 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 AC012442.3-202ENST00000636742 206 ntBASIC4.32□□□□□ -1.72
HOXA2O43364 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA2O43364 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA2O43364 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA2O43364 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA2O43364 MIR30B-201ENST00000384850 88 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 RNA5SP354-201ENST00000391247 136 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 MIR891A-201ENST00000401237 79 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 MIR1251-201ENST00000408552 70 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 SNORA3.3-201ENST00000408712 125 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXA2O43364 Pinc.1-201ENST00000616452 154 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 AC106754.2-201ENST00000623006 233 ntBASIC4.31□□□□□ -1.72
HOXA2O43364 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA2O43364 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA2O43364 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXA2O43364 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 RNU6-1138P-201ENST00000365359 106 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 RNU6-1235P-201ENST00000384559 107 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 MIR23A-201ENST00000385245 73 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 GOT2P5-201ENST00000433995 546 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AC245102.2-201ENST00000448956 180 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA2O43364 snoU13.22-201ENST00000459428 104 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 RNU6-498P-201ENST00000459468 107 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AC006445.1-201ENST00000491925 405 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 OR9P1P-201ENST00000496431 281 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 RNU7-149P-201ENST00000516739 59 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA2O43364 MIR4765-201ENST00000585007 77 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AL365205.2-201ENST00000594586 68 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AC091167.4-201ENST00000605079 184 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 MIR432-201ENST00000606207 94 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 AL121772.2-201ENST00000614331 297 ntBASIC4.3□□□□□ -1.72
HOXA2O43364 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA2O43364 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HOXA2O43364 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA2O43364 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HOXA2O43364 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA2O43364 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 RNU6-1240P-201ENST00000365155 104 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 MIR7-3-201ENST00000384898 110 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 MIR767-201ENST00000390228 109 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 RNU6-1077P-201ENST00000410506 102 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXA2O43364 AC063976.3-201ENST00000426849 329 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 RPL30P4-201ENST00000429309 333 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 AF228730.3-201ENST00000436691 102 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 ATP5EP1-201ENST00000510257 156 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 RNA5SP112-201ENST00000515937 99 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 RNU6-844P-201ENST00000517175 102 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 AC013412.1-201ENST00000610687 192 ntBASIC4.29□□□□□ -1.72
HOXA2O43364 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXA2O43364 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA2O43364 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA2O43364 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA2O43364 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
HOXA2O43364 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HOXA2O43364 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
HOXA2O43364 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA2O43364 SNORA71.3-201ENST00000362582 128 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 RNU6-1209P-201ENST00000363655 107 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 Y_RNA.796-201ENST00000364268 102 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 Y_RNA.799-201ENST00000364992 102 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 MIR562-201ENST00000384894 95 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 RNA5SP252-201ENST00000391131 119 ntBASIC4.28□□□□□ -1.72
HOXA2O43364 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA2O43364 RPS4XP11-201ENST00000446897 772 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms