Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-1048P-201ENST00000364054 107 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU4-84P-201ENST00000364200 139 ntBASIC3.17□□□□□ -1.9
SHOXO15266 Y_RNA.343-201ENST00000365354 112 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU6-628P-201ENST00000410675 107 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
SHOXO15266 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
SHOXO15266 AC010618.1-201ENST00000469924 477 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU6-346P-201ENST00000516288 111 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU2-34P-201ENST00000516534 121 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNA5SP179-201ENST00000517284 121 ntBASIC3.17□□□□□ -1.9
SHOXO15266 AC106785.1-201ENST00000565935 262 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RN7SL600P-201ENST00000581811 299 ntBASIC3.17□□□□□ -1.9
SHOXO15266 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
SHOXO15266 AC091167.4-201ENST00000605079 184 ntBASIC3.17□□□□□ -1.9
SHOXO15266 AC006435.5-201ENST00000624486 112 ntBASIC3.17□□□□□ -1.9
SHOXO15266 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHOXO15266 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SHOXO15266 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.17□□□□□ -1.9
SHOXO15266 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SHOXO15266 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.17□□□□□ -1.9
SHOXO15266 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SHOXO15266 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SHOXO15266 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SHOXO15266 RNA5SP130-201ENST00000364431 114 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
SHOXO15266 SNORA20B-201ENST00000384220 132 ntBASIC3.16□□□□□ -1.9
SHOXO15266 SNORA70C-201ENST00000384538 135 ntBASIC3.16□□□□□ -1.9
SHOXO15266 MIR518C-201ENST00000384822 101 ntBASIC3.16□□□□□ -1.9
SHOXO15266 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RNU6-578P-201ENST00000390980 103 ntBASIC3.16□□□□□ -1.9
SHOXO15266 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RNU6-57P-201ENST00000411348 103 ntBASIC3.16□□□□□ -1.9
SHOXO15266 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOXO15266 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOXO15266 AL121890.1-201ENST00000435457 205 ntBASIC3.16□□□□□ -1.9
SHOXO15266 SEPT7P4-201ENST00000437076 306 ntBASIC3.16□□□□□ -1.9
SHOXO15266 AC016925.1-201ENST00000458303 298 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
SHOXO15266 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.16□□□□□ -1.9
SHOXO15266 ATP5EP1-201ENST00000510257 156 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
SHOXO15266 AC090877.1-201ENST00000561418 344 ntBASIC3.16□□□□□ -1.9
SHOXO15266 MIR4724-201ENST00000579485 89 ntBASIC3.16□□□□□ -1.9
SHOXO15266 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.16□□□□□ -1.9
SHOXO15266 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHOXO15266 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHOXO15266 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHOXO15266 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHOXO15266 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHOXO15266 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHOXO15266 SNORA27.1-201ENST00000362604 124 ntBASIC3.15□□□□□ -1.91
SHOXO15266 SNORD113-1-201ENST00000365321 69 ntBASIC3.15□□□□□ -1.91
SHOXO15266 RNU6-1235P-201ENST00000384559 107 ntBASIC3.15□□□□□ -1.91
SHOXO15266 CR769767.1-201ENST00000436337 346 ntBASIC3.15□□□□□ -1.91
SHOXO15266 RNU6-498P-201ENST00000459468 107 ntBASIC3.15□□□□□ -1.91
SHOXO15266 RPS26P55-201ENST00000471178 356 ntBASIC3.15□□□□□ -1.91
SHOXO15266 RPL36AP21-201ENST00000490372 323 ntBASIC3.15□□□□□ -1.91
SHOXO15266 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOXO15266 AC107027.2-201ENST00000512197 115 ntBASIC3.15□□□□□ -1.91
SHOXO15266 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
SHOXO15266 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.15□□□□□ -1.91
SHOXO15266 AL391903.3-201ENST00000612158 163 ntBASIC3.15□□□□□ -1.91
SHOXO15266 MIR548AY-201ENST00000617669 107 ntBASIC3.15□□□□□ -1.91
SHOXO15266 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOXO15266 AC112484.5-201ENST00000624189 228 ntBASIC3.15□□□□□ -1.91
SHOXO15266 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOXO15266 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOXO15266 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.15□□□□□ -1.91
SHOXO15266 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
SHOXO15266 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.14□□□□□ -1.91
SHOXO15266 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHOXO15266 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHOXO15266 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RNU6-546P-201ENST00000383991 107 ntBASIC3.14□□□□□ -1.91
SHOXO15266 SNORD14D-201ENST00000384390 87 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RNU6-376P-201ENST00000384731 106 ntBASIC3.14□□□□□ -1.91
SHOXO15266 MIR616-201ENST00000385293 97 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
SHOXO15266 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AL355796.1-201ENST00000406706 323 ntBASIC3.14□□□□□ -1.91
SHOXO15266 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AL606753.1-201ENST00000427435 87 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOXO15266 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
SHOXO15266 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RNU6-1337P-201ENST00000516525 95 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RN7SKP282-201ENST00000516824 299 ntBASIC3.14□□□□□ -1.91
SHOXO15266 RNU7-116P-201ENST00000516940 62 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOXO15266 AC022616.8-201ENST00000533569 253 ntBASIC3.14□□□□□ -1.91
SHOXO15266 MIR4431-201ENST00000579990 94 ntBASIC3.14□□□□□ -1.91
SHOXO15266 MIR3944-201ENST00000581277 108 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOXO15266 AC023043.3-201ENST00000593113 385 ntBASIC3.14□□□□□ -1.91
SHOXO15266 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
SHOXO15266 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHOXO15266 AC068647.2-201ENST00000637380 353 ntBASIC3.14□□□□□ -1.91
SHOXO15266 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms