Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATP2A1O14983 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
ATP2A1O14983 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ATP2A1O14983 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ATP2A1O14983 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATP2A1O14983 SNORA18.2-201ENST00000383865 132 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 Y_RNA.509-201ENST00000384506 99 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 MIR487A-201ENST00000385009 80 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 RNA5SP270-201ENST00000411361 118 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 SRIP3-201ENST00000413200 219 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.2□□□□□ -2.06
ATP2A1O14983 PRELID3BP1-201ENST00000457142 540 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 TOMM22P6-201ENST00000465035 409 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 RNU5F-4P-201ENST00000516581 114 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 RNU6-58P-201ENST00000517143 103 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.2□□□□□ -2.06
ATP2A1O14983 AC004584.2-201ENST00000570407 410 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 AC026271.5-201ENST00000577873 130 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 AL355802.3-201ENST00000607571 545 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 TCL6_2.1-201ENST00000615162 119 ntBASIC2.2□□□□□ -2.06
ATP2A1O14983 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ATP2A1O14983 MTND5P10-201ENST00000603719 1809 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-743P-201ENST00000364151 106 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-245P-201ENST00000384020 107 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-541P-201ENST00000384709 110 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 MIR190B-201ENST00000401119 79 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.19□□□□□ -2.06
ATP2A1O14983 AC007098.1-201ENST00000420122 367 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 MTND3P23-201ENST00000431980 347 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RPS23P5-201ENST00000495419 428 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 AC022493.2-201ENST00000506122 481 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.19□□□□□ -2.06
ATP2A1O14983 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-470P-201ENST00000515954 104 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-1098P-201ENST00000516772 96 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 RNU6-264P-201ENST00000517134 104 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
ATP2A1O14983 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.19□□□□□ -2.06
ATP2A1O14983 SUB1P3-201ENST00000564581 315 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.19□□□□□ -2.06
ATP2A1O14983 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
ATP2A1O14983 ZNF204P-201ENST00000416749 2397 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2A1O14983 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2A1O14983 Y_RNA.61-201ENST00000362835 102 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 Y_RNA.187-201ENST00000363918 113 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 RNU6-1040P-201ENST00000383974 107 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 Y_RNA.577-201ENST00000384794 101 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ATP2A1O14983 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 EDDM3CP-201ENST00000415977 425 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AF228730.4-201ENST00000421457 183 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AC004386.2-201ENST00000441858 148 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AC009237.7-201ENST00000447357 229 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AL137159.1-201ENST00000452808 512 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
ATP2A1O14983 AC093259.1-201ENST00000509755 300 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 RNA5SP490-201ENST00000517141 136 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 MIR4255-201ENST00000579351 72 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
ATP2A1O14983 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.18□□□□□ -2.06
ATP2A1O14983 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.18□□□□□ -2.06
ATP2A1O14983 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.18□□□□□ -2.06
ATP2A1O14983 RNU1-17P-201ENST00000363022 152 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU6-797P-201ENST00000363101 109 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU5F-3P-201ENST00000363767 117 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU6-99P-201ENST00000364721 107 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 Y_RNA.315-201ENST00000365117 102 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU6-159P-201ENST00000391080 106 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU1-139P-201ENST00000391307 165 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 HMGN2P18-201ENST00000450680 270 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 AP000870.1-201ENST00000472927 406 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU2-44P-201ENST00000516795 194 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.17□□□□□ -2.06
ATP2A1O14983 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.17□□□□□ -2.06
ATP2A1O14983 MIR5006-201ENST00000583027 110 ntBASIC2.17□□□□□ -2.06
ATP2A1O14983 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.17□□□□□ -2.06
ATP2A1O14983 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ATP2A1O14983 RNU6-490P-201ENST00000362985 107 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 Y_RNA.106-201ENST00000363189 100 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 Y_RNA.146-201ENST00000363549 102 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RNU6-280P-201ENST00000364145 104 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms