Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 RNU6-1031P-201ENST00000384773 107 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 RNU6-903P-201ENST00000391270 109 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.63□□□□□ -2.31
UBFD1O14562 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.63□□□□□ -2.31
UBFD1O14562 NFU1P2-201ENST00000448700 469 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.63□□□□□ -2.31
UBFD1O14562 SNORD124-201ENST00000459577 104 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC048334.1-201ENST00000477975 159 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 SCARNA16.2-201ENST00000516520 172 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 RNU2-34P-201ENST00000516534 121 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 RNU6-612P-201ENST00000516909 102 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 SNORA70.22-201ENST00000517160 124 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC060788.1-201ENST00000521318 469 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 MRPS36P4-201ENST00000534436 298 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC022217.4-201ENST00000604389 163 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 AC097065.2-201ENST00000608159 533 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.62□□□□□ -2.31
UBFD1O14562 RNU4-21P-201ENST00000362802 126 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 RNU6-553P-201ENST00000364047 96 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 RNU6-1305P-201ENST00000364353 104 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 Y_RNA.363-201ENST00000365529 113 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 Y_RNA.374-201ENST00000365606 101 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 MIR487A-201ENST00000385009 80 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
UBFD1O14562 RNU6-910P-201ENST00000390844 107 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 RNU6-248P-201ENST00000410720 107 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 POLR2J4-204ENST00000418424 324 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.62□□□□□ -2.31
UBFD1O14562 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.62□□□□□ -2.31
UBFD1O14562 MTCO2P3-201ENST00000442543 421 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 RPL39P38-201ENST00000467018 153 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.62□□□□□ -2.31
UBFD1O14562 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.62□□□□□ -2.31
UBFD1O14562 RNU6-232P-201ENST00000517144 64 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.62□□□□□ -2.31
UBFD1O14562 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.62□□□□□ -2.31
UBFD1O14562 AL390123.1-201ENST00000603216 237 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 RMST_3.1-201ENST00000611651 109 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 AL021879.1-201ENST00000611756 288 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 TCL6_2.1-201ENST00000615162 119 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 uc_338.11-201ENST00000619132 160 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 AC009161.2-201ENST00000624626 138 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 AL442644.1-201ENST00000454390 3105 ntBASIC0.62□□□□□ -2.31
UBFD1O14562 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UBFD1O14562 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 SNORA72.2-201ENST00000365028 127 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 RNU2-29P-201ENST00000410423 189 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 RNU6-57P-201ENST00000411348 103 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 RAB28P5-201ENST00000427490 651 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 MTND3P9-201ENST00000429526 346 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.61□□□□□ -2.31
UBFD1O14562 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.61□□□□□ -2.31
UBFD1O14562 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.61□□□□□ -2.31
UBFD1O14562 SNORA31.2-201ENST00000516019 134 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC069113.1-201ENST00000517763 267 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AL137161.1-201ENST00000532231 390 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.61□□□□□ -2.31
UBFD1O14562 AC009094.1-201ENST00000564443 426 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC245014.2-201ENST00000603689 287 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AP000907.4-201ENST00000604143 237 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC246785.4-201ENST00000605374 287 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC027449.1-201ENST00000608890 407 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC064836.2-201ENST00000609491 462 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC106754.2-201ENST00000623006 233 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AF246928.1-201ENST00000623768 87 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 AC079248.2-201ENST00000623779 326 ntBASIC0.61□□□□□ -2.31
UBFD1O14562 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.61□□□□□ -2.31
UBFD1O14562 Y_RNA.124-201ENST00000363339 93 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 SNORA67.2-201ENST00000384300 149 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 MIR19B1-201ENST00000384829 87 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
UBFD1O14562 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 MTCYBP8-201ENST00000422855 651 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AC133104.1-201ENST00000429100 218 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.6□□□□□ -2.31
UBFD1O14562 AC002429.1-201ENST00000437672 148 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AL031667.1-201ENST00000440222 725 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.6□□□□□ -2.31
UBFD1O14562 RNU7-57P-201ENST00000459540 60 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 SNORD42A-201ENST00000459584 64 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.6□□□□□ -2.31
UBFD1O14562 GMFBP1-201ENST00000467831 427 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 CCDC34P1-201ENST00000507441 517 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AC025465.4-201ENST00000513422 638 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 RNA5SP168-201ENST00000516642 112 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 RNU6-922P-201ENST00000516753 99 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AP002963.1-201ENST00000530590 184 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.6□□□□□ -2.31
UBFD1O14562 MIR3913-1-201ENST00000577744 102 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 MIR3915-201ENST00000578518 97 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AP001596.2-201ENST00000608410 312 ntBASIC0.6□□□□□ -2.31
UBFD1O14562 AC087683.2-201ENST00000611384 326 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms