Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.86□□□□□ -2.11
RTCAO00442 YWHAEP4-201ENST00000505390 198 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNU7-175P-201ENST00000515915 61 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNU1-41P-201ENST00000516161 162 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNU1-48P-201ENST00000516400 162 ntBASIC1.86□□□□□ -2.11
RTCAO00442 RNU6-1098P-201ENST00000516772 96 ntBASIC1.86□□□□□ -2.11
RTCAO00442 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
RTCAO00442 CBX3P8-201ENST00000532412 525 ntBASIC1.86□□□□□ -2.11
RTCAO00442 AC027288.2-201ENST00000553028 243 ntBASIC1.86□□□□□ -2.11
RTCAO00442 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.86□□□□□ -2.11
RTCAO00442 SNRPGP20-201ENST00000604477 205 ntBASIC1.86□□□□□ -2.11
RTCAO00442 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
RTCAO00442 AC104260.1-201ENST00000616660 539 ntBASIC1.86□□□□□ -2.11
RTCAO00442 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
RTCAO00442 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.86□□□□□ -2.11
RTCAO00442 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RTCAO00442 Y_RNA.387-201ENST00000383918 102 ntBASIC1.85□□□□□ -2.11
RTCAO00442 Y_RNA.404-201ENST00000383978 102 ntBASIC1.85□□□□□ -2.11
RTCAO00442 SNORA12.2-201ENST00000391040 156 ntBASIC1.85□□□□□ -2.11
RTCAO00442 MTCYBP4-201ENST00000401524 249 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AC123900.1-201ENST00000420390 96 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AC009237.7-201ENST00000447357 229 ntBASIC1.85□□□□□ -2.11
RTCAO00442 TOMM22P6-201ENST00000465035 409 ntBASIC1.85□□□□□ -2.11
RTCAO00442 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
RTCAO00442 ATP5EP1-201ENST00000510257 156 ntBASIC1.85□□□□□ -2.11
RTCAO00442 RNU6-58P-201ENST00000517143 103 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AC134698.4-201ENST00000523451 826 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.85□□□□□ -2.11
RTCAO00442 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
RTCAO00442 MIR5690-201ENST00000583739 73 ntBASIC1.85□□□□□ -2.11
RTCAO00442 AC013412.1-201ENST00000610687 192 ntBASIC1.85□□□□□ -2.11
RTCAO00442 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
RTCAO00442 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
RTCAO00442 RNU5F-3P-201ENST00000363767 117 ntBASIC1.84□□□□□ -2.11
RTCAO00442 MIR32-201ENST00000384965 70 ntBASIC1.84□□□□□ -2.11
RTCAO00442 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RTCAO00442 RNU6-159P-201ENST00000391080 106 ntBASIC1.84□□□□□ -2.11
RTCAO00442 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.11
RTCAO00442 MIR320B2-201ENST00000408479 138 ntBASIC1.84□□□□□ -2.11
RTCAO00442 MTND4LP11-201ENST00000422184 280 ntBASIC1.84□□□□□ -2.11
RTCAO00442 MTND4P17-201ENST00000470444 350 ntBASIC1.84□□□□□ -2.11
RTCAO00442 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.84□□□□□ -2.11
RTCAO00442 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.11
RTCAO00442 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.84□□□□□ -2.11
RTCAO00442 MIR449C-201ENST00000516047 92 ntBASIC1.84□□□□□ -2.11
RTCAO00442 RNU6-344P-201ENST00000516635 111 ntBASIC1.84□□□□□ -2.11
RTCAO00442 APOOP3-201ENST00000536787 586 ntBASIC1.84□□□□□ -2.11
RTCAO00442 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.11
RTCAO00442 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.84□□□□□ -2.11
RTCAO00442 AC100812.1-201ENST00000607622 580 ntBASIC1.84□□□□□ -2.11
RTCAO00442 PISRT1.1-201ENST00000616930 107 ntBASIC1.84□□□□□ -2.11
RTCAO00442 AL008636.1-201ENST00000625038 1018 ntBASIC1.84□□□□□ -2.11
RTCAO00442 AL669831.3-213ENST00000636676 183 ntBASIC1.84□□□□□ -2.11
RTCAO00442 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTCAO00442 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RTCAO00442 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
RTCAO00442 MIR340-201ENST00000362125 95 ntBASIC1.83□□□□□ -2.12
RTCAO00442 Y_RNA.319-201ENST00000365138 92 ntBASIC1.83□□□□□ -2.12
RTCAO00442 SNORA18.2-201ENST00000383865 132 ntBASIC1.83□□□□□ -2.12
RTCAO00442 RNA5SP213-201ENST00000391031 106 ntBASIC1.83□□□□□ -2.12
RTCAO00442 RNU1-139P-201ENST00000391307 165 ntBASIC1.83□□□□□ -2.12
RTCAO00442 SNORA75.6-201ENST00000391318 127 ntBASIC1.83□□□□□ -2.12
RTCAO00442 ELOCP24-201ENST00000456370 334 ntBASIC1.83□□□□□ -2.12
RTCAO00442 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.83□□□□□ -2.12
RTCAO00442 RPL7P42-201ENST00000481005 679 ntBASIC1.83□□□□□ -2.12
RTCAO00442 RNU5F-4P-201ENST00000516581 114 ntBASIC1.83□□□□□ -2.12
RTCAO00442 RNA5SP384-201ENST00000516615 116 ntBASIC1.83□□□□□ -2.12
RTCAO00442 SUB1P4-201ENST00000566062 339 ntBASIC1.83□□□□□ -2.12
RTCAO00442 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
RTCAO00442 AL359757.2-201ENST00000624309 274 ntBASIC1.83□□□□□ -2.12
RTCAO00442 AC008873.1-201ENST00000625051 138 ntBASIC1.83□□□□□ -2.12
RTCAO00442 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTCAO00442 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.2-201ENST00000362330 96 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNY1P16-201ENST00000363063 111 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.405-201ENST00000383979 100 ntBASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.451-201ENST00000384200 100 ntBASIC1.82□□□□□ -2.12
RTCAO00442 SNORA67.2-201ENST00000384300 149 ntBASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.473-201ENST00000384333 102 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU6-1297P-201ENST00000384415 104 ntBASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.524-201ENST00000384564 100 ntBASIC1.82□□□□□ -2.12
RTCAO00442 Y_RNA.561-201ENST00000384694 100 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU6-370P-201ENST00000411008 104 ntBASIC1.82□□□□□ -2.12
RTCAO00442 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.82□□□□□ -2.12
RTCAO00442 MTCYBP10-201ENST00000424905 650 ntBASIC1.82□□□□□ -2.12
RTCAO00442 AC004386.2-201ENST00000441858 148 ntBASIC1.82□□□□□ -2.12
RTCAO00442 AC093019.1-201ENST00000443135 252 ntBASIC1.82□□□□□ -2.12
RTCAO00442 HMGN2P23-201ENST00000456759 269 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU7-152P-201ENST00000458982 64 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU7-14P-201ENST00000459331 62 ntBASIC1.82□□□□□ -2.12
RTCAO00442 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
RTCAO00442 RNVU1-2-201ENST00000516326 135 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU2-34P-201ENST00000516534 121 ntBASIC1.82□□□□□ -2.12
RTCAO00442 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.82□□□□□ -2.12
RTCAO00442 SUB1P3-201ENST00000564581 315 ntBASIC1.82□□□□□ -2.12
RTCAO00442 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.82□□□□□ -2.12
RTCAO00442 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms