Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SNORA12-201ENST00000391162 147 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AL356583.2-201ENST00000426536 280 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC104629.2-201ENST00000468627 598 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC015724.1-201ENST00000478577 156 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 RNA5SP337-201ENST00000517007 109 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 OR8K2P-201ENST00000524645 927 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC023158.1-201ENST00000561632 1025 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 MIR4676-201ENST00000583078 72 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC078795.3-201ENST00000602913 472 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AL162376.1-201ENST00000624117 175 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AC019226.1-201ENST00000625666 515 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 AL450472.1-202ENST00000637286 180 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 SEC63P2-201ENST00000503863 1939 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 MIR409-201ENST00000362237 79 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 SNORA72.2-201ENST00000365028 127 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RNU6-934P-201ENST00000365154 107 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RNA5SP117-201ENST00000365294 118 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RNU6-622P-201ENST00000384272 103 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 SNORA75.1-201ENST00000391130 148 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 DPRXP1-201ENST00000426312 460 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RPL31P54-201ENST00000429803 370 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 RPS24P1-201ENST00000438550 371 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 HSFY5P-201ENST00000453726 309 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 AC093519.1-201ENST00000566109 298 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 AL118556.2-201ENST00000614375 824 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 U6.107-201ENST00000637108 79 ntBASIC-1.21□□□□□ -2.6
LINC01546A6NGU7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 RNU6-843P-201ENST00000384454 104 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 MIR204-201ENST00000385200 110 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 MIR802-201ENST00000390235 94 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 RNU2-23P-201ENST00000410545 195 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 CCDC58P2-201ENST00000417131 366 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 PSMA6P3-201ENST00000428242 164 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 FABP5P15-201ENST00000453566 214 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 HMGN3P1-201ENST00000453847 193 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 RNU7-73P-201ENST00000458743 63 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 RNU7-41P-201ENST00000515917 61 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 SNORA18.4-201ENST00000516440 124 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 AC011451.2-201ENST00000604303 598 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 AL359075.3-201ENST00000613288 217 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 AL590396.2-201ENST00000636511 1041 ntBASIC-1.22□□□□□ -2.6
LINC01546A6NGU7 AP000568.1-201ENST00000282964 442 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 snoZ40.1-201ENST00000364540 72 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 RNU6-438P-201ENST00000365561 103 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 SNORA32.2-201ENST00000384049 122 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 RNU6-721P-201ENST00000410155 105 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 RNU6-567P-201ENST00000516746 107 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 AC140658.3-201ENST00000567603 271 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 FGF7P1-201ENST00000582820 288 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 AL161798.1-201ENST00000604630 131 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 AC005332.6-201ENST00000613178 446 ntBASIC-1.23□□□□□ -2.61
LINC01546A6NGU7 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 U8.6-201ENST00000364939 135 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNU6-40P-201ENST00000384254 107 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNA5SP266-201ENST00000410273 108 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 POLR2KP2-201ENST00000438155 177 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNA5SP476-201ENST00000516613 103 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNU6-856P-201ENST00000516959 98 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNU6-840P-201ENST00000517275 65 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 AC138749.4-201ENST00000563970 127 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 MIR4771-2-201ENST00000577758 74 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 MIR4771-1-201ENST00000582617 74 ntBASIC-1.24□□□□□ -2.61
LINC01546A6NGU7 RNU6-212P-201ENST00000362642 104 ntBASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 AL117339.3-201ENST00000418733 162 ntBASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 GPM6BP2-201ENST00000432046 144 ntBASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 GPM6BP1-201ENST00000446387 144 ntBASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 AL360271.2-201ENST00000447710 161 ntBASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.25□□□□□ -2.61
LINC01546A6NGU7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms