Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 RNU6-806P-201ENST00000365147 105 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 RNA5SP475-201ENST00000410568 110 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 IPO7P1-201ENST00000442031 636 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 AL731563.1-201ENST00000442202 214 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 AC093259.1-201ENST00000509755 300 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 MTCO2P24-201ENST00000515611 426 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 AC104984.5-201ENST00000586878 94 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 AC078899.3-201ENST00000599065 212 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
MBD3L4A6NDZ8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MBD3L4A6NDZ8 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 RNU6-805P-201ENST00000365643 106 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 MIR548B-201ENST00000385247 97 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 MIR1302-3-201ENST00000408128 138 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 OOSP1P1-201ENST00000423265 274 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 TOMM22P2-201ENST00000430735 237 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 MTCYBP9-201ENST00000431021 303 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 PRELID3BP1-201ENST00000457142 540 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 SRIP1-201ENST00000489235 288 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 RNA5SP385-201ENST00000515947 110 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 RNA5SP380-201ENST00000517190 98 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AK6P2-201ENST00000549020 471 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AC136932.1-201ENST00000574771 208 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 MIR4300-201ENST00000581016 96 ntBASIC2.54□□□□□ -2
MBD3L4A6NDZ8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.54□□□□□ -2
MBD3L4A6NDZ8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.230-201ENST00000364348 109 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 RN7SKP58-201ENST00000411010 305 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 UQCRHP3-201ENST00000451503 251 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 LINC01399-202ENST00000458450 244 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 RNU7-57P-201ENST00000459540 60 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 RNU7-110P-201ENST00000516891 62 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 MIR6715A-201ENST00000615929 79 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 AC091932.3-201ENST00000624223 323 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 AL355596.1-201ENST00000565399 3996 ntBASIC2.53□□□□□ -2
MBD3L4A6NDZ8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
MBD3L4A6NDZ8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2.01
MBD3L4A6NDZ8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.144-201ENST00000363521 113 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-1175P-201ENST00000365200 107 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-975P-201ENST00000384296 105 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-196P-201ENST00000384315 107 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-21P-201ENST00000384710 107 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU5A-5P-201ENST00000411054 116 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-57P-201ENST00000411348 103 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 AC016717.1-201ENST00000448918 286 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 RN7SKP43-201ENST00000516173 320 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 AP003733.2-201ENST00000529409 171 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 AP002001.1-203ENST00000534002 267 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.52□□□□□ -2.01
MBD3L4A6NDZ8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC245060.5-201ENST00000610778 3293 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms