Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RPL17P51-201ENST00000605218 238 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 SDR42E1P4-201ENST00000620894 481 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AC090517.3-201ENST00000625170 141 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 MTND5P6-201ENST00000422338 1798 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 MIR335-201ENST00000362173 94 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 RNU6-727P-201ENST00000363592 107 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 RNU6-379P-201ENST00000363813 104 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 SNORD32B-201ENST00000364460 84 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AL390729.2-201ENST00000416137 156 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC139712.2-201ENST00000424302 339 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC009237.7-201ENST00000447357 229 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 RNU6-625P-201ENST00000459412 107 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 SEPT14P8-201ENST00000508026 178 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 RNU2-44P-201ENST00000516795 194 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 RNU6-794P-201ENST00000517261 64 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 DEFB131C-201ENST00000528817 165 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 MIR5006-201ENST00000583027 110 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 SNORD113-5-201ENST00000607261 78 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC011373.1-201ENST00000607270 237 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AC090425.1-201ENST00000610007 140 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPDC1A2A3K4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.15□□□□□ -1.9
PTPDC1A2A3K4 RNU6-859P-201ENST00000362728 107 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RNU4-90P-201ENST00000362773 141 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RNU1-72P-201ENST00000362976 153 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RNU6-1318P-201ENST00000365389 103 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.541-201ENST00000384640 113 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AL033519.2-201ENST00000403958 392 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RNA5SP21-201ENST00000410917 96 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RNU6-847P-201ENST00000411115 108 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AC004866.1-201ENST00000411748 78 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 MIR3199-1-201ENST00000582434 88 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AC012433.1-201ENST00000588916 398 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AC005176.2-201ENST00000596933 147 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AC010620.2-201ENST00000600135 313 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPDC1A2A3K4 AL391987.6-201ENST00000305671 199 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.237-201ENST00000364439 102 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 RNU6-301P-201ENST00000384277 107 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 MIR218-1-201ENST00000384999 110 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 ELOCP21-201ENST00000412558 336 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 RNU6-1338P-201ENST00000516328 91 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 RNU7-110P-201ENST00000516891 62 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 AL713866.2-201ENST00000603579 219 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 SNORD11B-201ENST00000607707 90 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
PTPDC1A2A3K4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 RNU6-102P-201ENST00000384485 104 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 RNU6-21P-201ENST00000384710 107 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 HSPE1P25-201ENST00000455484 251 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 DEFB108E-201ENST00000524692 240 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 MIR3128-201ENST00000581957 66 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 MIR4635-201ENST00000583759 79 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC069294.1-201ENST00000608397 350 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.13□□□□□ -1.91
PTPDC1A2A3K4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RNU6-290P-201ENST00000365212 101 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.478-201ENST00000384358 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms