Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR454-201ENST00000390180 115 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORA16.2-201ENST00000390991 127 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR1253-201ENST00000408273 105 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU4-46P-201ENST00000410818 138 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AL356583.2-201ENST00000426536 280 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RPEP5-201ENST00000441137 268 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU7-57P-201ENST00000459540 60 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC007215.1-201ENST00000464893 276 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORA70.12-201ENST00000516084 153 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-496P-201ENST00000516145 99 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-917P-201ENST00000516294 104 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC007834.2-201ENST00000536310 343 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AL357312.1-201ENST00000603879 298 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 uc_338.11-201ENST00000619132 160 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-1240P-201ENST00000365155 104 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-163P-201ENST00000384396 106 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORD116-13-201ENST00000384408 92 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-1127P-201ENST00000384580 107 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR193B-201ENST00000384907 83 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORD70.1-201ENST00000391007 85 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AL355796.1-201ENST00000406706 323 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC245047.3-201ENST00000429428 127 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC005002.2-201ENST00000438228 269 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 MTCO2P3-201ENST00000442543 421 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC079781.2-201ENST00000446424 169 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 USP9YP12-201ENST00000450481 570 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 snoU13.6-201ENST00000458785 104 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-221P-201ENST00000459541 99 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AGGF1P4-201ENST00000568249 801 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC068790.2-201ENST00000602601 557 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AL158050.2-201ENST00000605336 568 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 AC010487.4-201ENST00000637027 61 ntBASIC0.28□□□□□ -2.36
TRAV1-1A0A0B4J248 RNA5SP499-201ENST00000363982 119 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-266P-201ENST00000364225 107 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORA2.2-201ENST00000365473 135 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 Y_RNA.399-201ENST00000383955 105 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AL451046.2-201ENST00000403074 277 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-57P-201ENST00000411348 103 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 EPS15P1-201ENST00000448836 336 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RPS20P10-201ENST00000451209 253 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 MTCO3P8-201ENST00000453691 755 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC022364.2-201ENST00000457963 554 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 snoU13.25-201ENST00000458945 104 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU7-182P-201ENST00000459009 62 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-947P-201ENST00000516264 106 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 Vault.3-201ENST00000516676 95 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNA5SP480-201ENST00000516840 109 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-410P-201ENST00000517006 107 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-323P-201ENST00000521915 107 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR3941-201ENST00000582572 103 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 RSL24D1P11-201ENST00000591045 491 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC097065.2-201ENST00000608159 533 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 PVT1_3.1-201ENST00000620853 95 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 AC008873.1-201ENST00000625051 138 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 snoZ196.1-201ENST00000625269 89 ntBASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV1-1A0A0B4J248 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORD114-26-201ENST00000363543 72 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-1305P-201ENST00000364353 104 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-945P-201ENST00000383947 107 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC008134.1-201ENST00000420943 193 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AL354692.1-201ENST00000423044 315 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC074290.1-201ENST00000448883 135 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC245047.8-201ENST00000456455 284 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 U7.7-201ENST00000459276 60 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 GMFBP1-201ENST00000467831 427 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC010493.1-201ENST00000513479 292 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC106038.2-201ENST00000520706 568 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AP002001.1-203ENST00000534002 267 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR4778-201ENST00000577635 80 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 BNIP3P39-201ENST00000601077 554 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AP000907.4-201ENST00000604143 237 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC004832.4-201ENST00000608952 331 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms