Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 snoU109.3-201ENST00000459477 145 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-221P-201ENST00000459541 99 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 RNU2-69P-201ENST00000516061 100 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 SNORD27.1-201ENST00000516319 72 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 PCMTD1P2-201ENST00000565017 355 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 Z99497.2-201ENST00000603634 310 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 RNU4-5P-201ENST00000607255 135 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC242852.1-201ENST00000612151 96 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AL391903.3-201ENST00000612158 163 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AL607023.1-201ENST00000620045 248 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC006001.4-201ENST00000622243 395 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC244015.1-201ENST00000622301 99 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 AC068787.1-201ENST00000623908 691 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
TRAV3A0A0B4J244 RNU5B-2P-201ENST00000363036 113 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-501P-201ENST00000364072 100 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-1335P-201ENST00000365426 107 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 Y_RNA.367-201ENST00000365544 101 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AL355143.1-201ENST00000407101 841 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 MIR1253-201ENST00000408273 105 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RNA5SP193-201ENST00000410353 107 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RNU4-46P-201ENST00000410818 138 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AL356583.2-201ENST00000426536 280 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AL365184.2-201ENST00000431139 435 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC004386.2-201ENST00000441858 148 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 MTCO2P7-201ENST00000446518 666 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC074290.1-201ENST00000448883 135 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RPL39P39-201ENST00000455840 151 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC022878.1-201ENST00000530684 149 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 MIR3941-201ENST00000582572 103 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 MIR5006-201ENST00000583027 110 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC004223.2-201ENST00000590309 544 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC068790.2-201ENST00000602601 557 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 uc_338.11-201ENST00000619132 160 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 AC006927.3-201ENST00000638789 384 ntBASIC0.24□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-1287P-201ENST00000362914 107 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNY1P12-201ENST00000364251 105 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU4-41P-201ENST00000364426 143 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 SNORA20.2-201ENST00000383922 131 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-74P-201ENST00000384235 107 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-1060P-201ENST00000384664 107 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-1237P-201ENST00000384777 107 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 MIR454-201ENST00000390180 115 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 SNORD89-201ENST00000390981 114 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC008134.1-201ENST00000420943 193 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 snoU13.25-201ENST00000458945 104 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC022493.2-201ENST00000506122 481 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AP002001.1-203ENST00000534002 267 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 AL360219.1-201ENST00000610230 366 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 snoZ196.1-201ENST00000625269 89 ntBASIC0.23□□□□□ -2.37
TRAV3A0A0B4J244 Y_RNA.205-201ENST00000364128 113 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-1240P-201ENST00000365155 104 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-424P-201ENST00000384367 105 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-393P-201ENST00000384475 107 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AL355796.1-201ENST00000406706 323 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 MTCO2P3-201ENST00000442543 421 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 RNU7-57P-201ENST00000459540 60 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 GMFBP1-201ENST00000467831 427 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 RNU6-430P-201ENST00000517078 107 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 MTND4LP26-201ENST00000518144 282 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AP003716.2-201ENST00000528260 108 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC005771.1-201ENST00000585581 349 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC018645.2-201ENST00000609151 472 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 AC139792.3-201ENST00000623525 224 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 U6.114-201ENST00000636407 96 ntBASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
TRAV3A0A0B4J244 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-500P-201ENST00000362349 107 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 Y_RNA.399-201ENST00000383955 105 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNA5SP511-201ENST00000410487 115 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-57P-201ENST00000411348 103 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AL512286.1-201ENST00000439244 400 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms