Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MIR8070-201ENST00000616510 88 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-501P-201ENST00000364072 100 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 MIR586-201ENST00000385035 97 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORA16.2-201ENST00000390991 127 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC004866.1-201ENST00000411748 78 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC098934.3-201ENST00000430450 190 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AL365184.2-201ENST00000431139 435 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC084290.1-201ENST00000434995 374 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC022364.2-201ENST00000457963 554 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC025647.1-201ENST00000517879 253 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC027419.1-201ENST00000522976 328 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 SUB1P2-201ENST00000556401 297 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 PCMTD1P2-201ENST00000565017 355 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC004584.2-201ENST00000570407 410 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC025627.3-201ENST00000582078 182 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 AC002044.1-201ENST00000606707 158 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU4-5P-201ENST00000607255 135 ntBASIC0.26□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORA2.2-201ENST00000365473 135 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 Y_RNA.367-201ENST00000365544 101 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC008134.1-201ENST00000420943 193 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AL445305.1-201ENST00000432577 575 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 MTCO3P8-201ENST00000453691 755 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC245047.8-201ENST00000456455 284 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 U7.7-201ENST00000459276 60 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC091951.3-201ENST00000504093 246 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORA70.12-201ENST00000516084 153 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AP000811.1-201ENST00000603803 651 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AP000907.4-201ENST00000604143 237 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC018714.1-201ENST00000605028 208 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 snoZ196.1-201ENST00000625269 89 ntBASIC0.25□□□□□ -2.37
TMEM56-RWDD3S4R434 RNA5SP432-201ENST00000362480 116 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-1240P-201ENST00000365155 104 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-393P-201ENST00000384475 107 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORD89-201ENST00000390981 114 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-1186P-201ENST00000410429 97 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RPS3AP3-201ENST00000411933 242 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 TAF9P1-201ENST00000445421 515 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 TAF9P2-201ENST00000454958 515 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 Y_RNA.638-201ENST00000459374 113 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU7-128P-201ENST00000517247 62 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 AC090572.1-201ENST00000519251 160 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 RSL24D1P11-201ENST00000591045 491 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 AC068792.1-201ENST00000621354 417 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 AC099654.13-201ENST00000639774 207 ntBASIC0.24□□□□□ -2.37
TMEM56-RWDD3S4R434 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AL596276.1-201ENST00000434465 418 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AC104850.1-201ENST00000435940 476 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 STAG3L5P-204ENST00000443759 179 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 EPS15P1-201ENST00000448836 336 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 snoU109.3-201ENST00000459477 145 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU2-69P-201ENST00000516061 100 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 RN7SKP12-201ENST00000516275 143 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-323P-201ENST00000521915 107 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 MIR4999-201ENST00000585029 91 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AL133173.2-201ENST00000614270 90 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 AC027807.2-201ENST00000616099 408 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 MIR6513-201ENST00000621188 64 ntBASIC0.23□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-266P-201ENST00000364225 107 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORA40.4-201ENST00000390971 128 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORD70.1-201ENST00000391007 85 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU4-46P-201ENST00000410818 138 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 LINC01399-202ENST00000458450 244 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC022493.2-201ENST00000506122 481 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC079140.5-201ENST00000507882 310 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC016256.1-201ENST00000547971 354 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 MIR4775-201ENST00000581168 75 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC112191.3-201ENST00000604371 277 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL096861.1-201ENST00000610899 123 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL391903.3-201ENST00000612158 163 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AL078596.1-201ENST00000624856 447 ntBASIC0.22□□□□□ -2.37
TMEM56-RWDD3S4R434 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 Y_RNA.4-201ENST00000362333 112 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 Y_RNA.164-201ENST00000363709 102 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms