Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 U8.22-201ENST00000459141 133 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 HMGN2P9-201ENST00000476875 229 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-948P-201ENST00000516374 107 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 AC087441.2-201ENST00000529141 262 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 LINC02555-201ENST00000563933 1951 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR449A-201ENST00000362113 91 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 Y_RNA.128-201ENST00000363391 112 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 U3.8-201ENST00000363675 217 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR329-1-201ENST00000385028 80 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 HMGN2P39-201ENST00000398005 273 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC010095.1-201ENST00000443543 144 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AL357134.1-201ENST00000445848 426 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU1-131P-201ENST00000458943 161 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 Y_RNA.631-201ENST00000459607 101 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 RPS27AP9-201ENST00000477681 438 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 RNA5SP282-201ENST00000516355 108 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AL442163.3-201ENST00000554110 156 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC009127.3-201ENST00000570531 403 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC006600.1-201ENST00000572529 153 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR4529-201ENST00000578110 78 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR4446-201ENST00000578505 67 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 AC134503.1-201ENST00000633048 54 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR4272-201ENST00000635924 64 ntBASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.91□□□□□ -1.94
COL4A3BPQ9Y5P4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.813-201ENST00000364639 102 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORA67.2-201ENST00000384300 149 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC139712.2-201ENST00000424302 339 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 MZT1P2-201ENST00000604387 248 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC006157.1-201ENST00000611750 366 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AC083806.3-201ENST00000614016 455 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 AL606534.2-204ENST00000635008 178 ntBASIC2.9□□□□□ -1.95
COL4A3BPQ9Y5P4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP68-201ENST00000363885 119 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU4-76P-201ENST00000364509 141 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-975P-201ENST00000384296 105 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNY3P4-201ENST00000384428 101 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR518A2-201ENST00000384966 87 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-498P-201ENST00000459468 107 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 AC067942.3-201ENST00000512025 362 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 AC074133.1-201ENST00000515696 183 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU7-193P-201ENST00000516723 65 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 AP002770.2-201ENST00000543613 532 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR6817-201ENST00000615588 66 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 AC138305.3-201ENST00000624988 240 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR203B-201ENST00000636080 86 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 FO624990.1-201ENST00000636373 85 ntBASIC2.89□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU1-58P-201ENST00000362413 163 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP361-201ENST00000362686 118 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNY3P11-201ENST00000364153 102 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.526-201ENST00000384572 110 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP465-201ENST00000391195 109 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORA11.2-201ENST00000408318 127 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP504-201ENST00000410676 117 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 AC010531.2-201ENST00000465012 153 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-475P-201ENST00000516073 104 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 GNAI2P1-201ENST00000541815 315 ntBASIC2.88□□□□□ -1.95
COL4A3BPQ9Y5P4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-23P-201ENST00000363283 107 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-318P-201ENST00000384283 103 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNY1P14-201ENST00000384426 108 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 MTCO1P44-201ENST00000441935 243 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 PCNPP5-201ENST00000452246 481 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU7-57P-201ENST00000459540 60 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP148-201ENST00000516527 94 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms