Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGC4Q9Y5F7 AC010889.1-201ENST00000566193 2666 ntBASIC3.86□□□□□ -1.79
PCDHGC4Q9Y5F7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PCDHGC4Q9Y5F7 AC000403.1-201ENST00000613696 3585 ntBASIC3.86□□□□□ -1.79
PCDHGC4Q9Y5F7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 SNORA71B-202ENST00000439232 272 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 SNORD65B-201ENST00000459126 73 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNU7-57P-201ENST00000459540 60 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AC112771.1-201ENST00000463581 102 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RAC1P2-201ENST00000511164 579 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNA5SP153-201ENST00000516498 76 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNU6-63P-201ENST00000516690 95 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AC027419.1-201ENST00000522976 328 ntBASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGC4Q9Y5F7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 MTND5P18-201ENST00000445624 1801 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 Y_RNA.91-201ENST00000363042 107 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 SNORD14D-201ENST00000384390 87 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 PTMAP2-201ENST00000397627 327 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 RPL21P10-201ENST00000463521 490 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGC4Q9Y5F7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
PCDHGC4Q9Y5F7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHGC4Q9Y5F7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.84□□□□□ -1.8
PCDHGC4Q9Y5F7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORD73B-201ENST00000364394 72 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 Y_RNA.634-201ENST00000364811 113 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORA72-201ENST00000384339 132 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-106P-201ENST00000384405 107 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AL353705.1-201ENST00000433468 480 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AC010598.1-201ENST00000510378 103 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 RNA5SP20-201ENST00000515976 84 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGC4Q9Y5F7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AL672296.1-201ENST00000427780 2158 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR200C-201ENST00000384980 68 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 RNA5SP511-201ENST00000410487 115 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 CYCSP19-201ENST00000411715 316 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AL500522.2-201ENST00000448562 343 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AC083906.5-201ENST00000503722 328 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR3944-201ENST00000581277 108 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AL137849.1-201ENST00000604767 169 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AL022345.2-201ENST00000606307 135 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR6075-201ENST00000620782 95 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AC103988.1-201ENST00000566382 2177 ntBASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGC4Q9Y5F7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 430.8 ms