Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SUB1P2-201ENST00000556401 297 ntBASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 MIR4303-201ENST00000581299 66 ntBASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 AC087683.1-201ENST00000591187 441 ntBASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 AL133216.2-202ENST00000634512 349 ntBASIC0.84□□□□□ -2.27
CHTOPQ9Y3Y2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.194-201ENST00000363985 102 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-457P-201ENST00000363999 107 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU4-24P-201ENST00000364565 139 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1042P-201ENST00000384204 107 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-393P-201ENST00000384475 107 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1106P-201ENST00000390845 107 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA17.3-201ENST00000391159 129 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU2-9P-201ENST00000410194 145 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU2-29P-201ENST00000410423 189 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RNU2-16P-201ENST00000410712 136 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RAB28P5-201ENST00000427490 651 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC073464.1-201ENST00000429823 534 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RPS29P15-201ENST00000458329 171 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 RN7SKP219-201ENST00000516825 296 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC026470.2-201ENST00000561492 181 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AGGF1P4-201ENST00000568249 801 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 MIR4703-201ENST00000577728 79 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 MTND1P15-201ENST00000579262 949 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AL929325.1-201ENST00000603096 117 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AP001596.2-201ENST00000608410 312 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC017083.3-201ENST00000609955 700 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC021506.2-201ENST00000612354 169 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 Z99129.1-201ENST00000612510 255 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AC005562.2-201ENST00000618264 111 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 AL450472.1-202ENST00000637286 180 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 MTND5P26-201ENST00000426018 1752 ntBASIC0.83□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.1-201ENST00000352915 104 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.296-201ENST00000364930 108 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-259P-201ENST00000383999 107 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1158P-201ENST00000391167 107 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 RNU2-66P-201ENST00000410650 161 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 RNU4-55P-201ENST00000410731 137 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AL353193.1-201ENST00000421444 268 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC108210.2-201ENST00000503681 201 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC091874.1-201ENST00000511402 339 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC015712.3-201ENST00000559380 164 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 MTCO3P23-201ENST00000561363 289 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 MIR3683-201ENST00000580847 82 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 MTATP6P3-201ENST00000581686 676 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC008536.2-201ENST00000607284 349 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC104458.1-201ENST00000608243 463 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC007684.1-201ENST00000609671 477 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC093783.1-201ENST00000612976 329 ntBASIC0.82□□□□□ -2.28
CHTOPQ9Y3Y2 AC068700.1-201ENST00000565862 3754 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-996P-201ENST00000365438 107 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.399-201ENST00000383955 105 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-517P-201ENST00000384362 110 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1127P-201ENST00000384580 107 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.559-201ENST00000384686 107 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA40.6-201ENST00000391153 128 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-903P-201ENST00000391270 109 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RPL21P1-201ENST00000399532 476 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AP000275.1-201ENST00000411943 390 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC016907.1-201ENST00000419483 435 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AL606489.2-201ENST00000433886 234 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC073415.1-201ENST00000449240 153 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 SCARNA18-201ENST00000459004 134 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU7-63P-201ENST00000459054 62 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC107401.1-201ENST00000503426 685 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 RNU2-69P-201ENST00000516061 100 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC090142.3-201ENST00000519012 385 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC136628.3-201ENST00000521868 290 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AL137161.1-201ENST00000532231 390 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 MIR3941-201ENST00000582572 103 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AP001330.5-201ENST00000607176 411 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC103591.3-201ENST00000608684 209 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 AC073534.2-201ENST00000620377 381 ntBASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.81□□□□□ -2.28
CHTOPQ9Y3Y2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms