Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-26P-201ENST00000383985 107 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-281P-201ENST00000384212 103 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 MIR208B-201ENST00000401172 77 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 MIR1261-201ENST00000408659 82 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 Z98742.2-201ENST00000431564 187 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AC073901.1-201ENST00000462471 408 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AL121594.1-201ENST00000475906 575 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 SNORA31.6-201ENST00000516241 130 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-1012P-201ENST00000516606 109 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 SCARNA11.3-201ENST00000517276 130 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AC093023.1-201ENST00000547375 507 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 MIR5695-201ENST00000579717 85 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AL356575.1-201ENST00000603008 283 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 AC006006.1-201ENST00000603082 144 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 MIR8062-201ENST00000621515 85 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.19-201ENST00000362462 99 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-318P-201ENST00000384283 103 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-1093P-201ENST00000391194 107 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 AL512633.1-201ENST00000399931 655 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 CBX3P9-201ENST00000402326 552 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 MIR320B2-201ENST00000408479 138 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.618-201ENST00000410949 107 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RPL31P41-201ENST00000477967 372 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 TRBV12-1-201ENST00000479785 344 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 MRPS36P2-201ENST00000512569 299 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RNA5SP112-201ENST00000515937 99 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RNU2-53P-201ENST00000516257 147 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 RN7SKP49-201ENST00000516675 260 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 AC091544.4-201ENST00000555268 342 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 UBL5P4-201ENST00000562584 236 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 AC240442.1-201ENST00000616055 283 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 U6.104-201ENST00000637979 90 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 BX322639.1-202ENST00000423987 2213 ntBASIC2.83□□□□□ -1.96
SSX2IPQ9Y2D8 SNORA25.6-201ENST00000364121 118 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.512-201ENST00000384518 102 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 MIR487A-201ENST00000385009 80 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-130P-201ENST00000411112 103 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 MIR4659A-201ENST00000580269 81 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 AC125232.2-201ENST00000592457 143 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSX2IPQ9Y2D8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-486P-201ENST00000363116 107 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-245P-201ENST00000384020 107 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 MRPL35P1-201ENST00000404272 572 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 MIR1302-6-201ENST00000408466 90 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 SNORD12B-201ENST00000410433 91 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 PCNPP5-201ENST00000452246 481 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 SNRPGP20-201ENST00000604477 205 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 PCGEM1.1-201ENST00000613431 131 ntBASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSX2IPQ9Y2D8 ZNF204P-201ENST00000416749 2397 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-378P-201ENST00000384324 107 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 RNA5SP201-201ENST00000410316 124 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 EIF4EP4-201ENST00000424916 578 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 LINC01399-202ENST00000458450 244 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 CYCSP23-201ENST00000519781 313 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 AC027176.1-201ENST00000560204 514 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 U4.3-201ENST00000621047 82 ntBASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX2IPQ9Y2D8 RNA5SP361-201ENST00000362686 118 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 U3.9-201ENST00000363823 204 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-873P-201ENST00000363833 107 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 SNORA70B-201ENST00000384210 135 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms