Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-1010P-201ENST00000362757 107 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 SNORA63.4-201ENST00000362763 126 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-301P-201ENST00000384277 107 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU1-89P-201ENST00000384592 164 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-768P-201ENST00000384683 107 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU7-197P-201ENST00000458836 62 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC092991.1-201ENST00000477176 376 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 PHBP14-201ENST00000512887 367 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC020914.4-201ENST00000597690 277 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC110741.2-201ENST00000605278 268 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AC025754.2-201ENST00000606491 432 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-91P-201ENST00000607774 107 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 AP000553.6-201ENST00000641242 118 ntBASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ZC3H4Q9UPT8 snoU2_19.1-201ENST00000362361 80 ntBASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 AIMP1P2-201ENST00000425294 312 ntBASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 AL714022.1-201ENST00000439897 151 ntBASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 RNA5SP76-201ENST00000516277 87 ntBASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 AP000867.2-201ENST00000532468 320 ntBASIC4.46□□□□□ -1.69
ZC3H4Q9UPT8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-655P-201ENST00000362858 107 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 U3.8-201ENST00000363675 217 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-1305P-201ENST00000364353 104 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-1228P-201ENST00000391014 107 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 AL031121.1-201ENST00000406553 254 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-588P-201ENST00000410281 105 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-383P-201ENST00000410864 94 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RPS27P1-201ENST00000450552 247 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 RPL31P61-201ENST00000496160 376 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 MIR4672-201ENST00000583126 81 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.46□□□□□ -1.7
ZC3H4Q9UPT8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-1210P-201ENST00000363775 107 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 MIR548B-201ENST00000385247 97 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 SNORA12-201ENST00000391162 147 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 COTL1P1-201ENST00000422309 375 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AC010154.1-201ENST00000425857 269 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 snoU13.14-201ENST00000459372 104 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AC112771.1-201ENST00000463581 102 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AC117454.1-201ENST00000491120 168 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 RPS27P26-201ENST00000494583 239 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AL031274.2-201ENST00000599419 203 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 AC068647.2-201ENST00000637380 353 ntBASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZC3H4Q9UPT8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-834P-201ENST00000362367 110 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RNA5SP374-201ENST00000362939 125 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RNA5SP424-201ENST00000390988 115 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 CYCSP49-201ENST00000420810 319 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RPS3P1-201ENST00000456781 192 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RNU7-107P-201ENST00000459121 61 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RAC1P5-201ENST00000512182 576 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-659P-201ENST00000516454 104 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 MIR2114-201ENST00000516645 80 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 MIR3646-201ENST00000578301 84 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 AC099778.2-201ENST00000610904 211 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 AC010889.1-201ENST00000566193 2666 ntBASIC4.44□□□□□ -1.7
ZC3H4Q9UPT8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms