Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RPS29P21-201ENST00000496272 170 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 MIR449C-201ENST00000516047 92 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 AL365205.2-201ENST00000594586 68 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 AL022345.2-201ENST00000606307 135 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 Pinc.1-201ENST00000616452 154 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 AC039056.2-201ENST00000622261 511 ntBASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGC3Q9UN70 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.52-201ENST00000362760 96 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.116-201ENST00000363292 103 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 MIR767-201ENST00000390228 109 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP354-201ENST00000391247 136 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RPS26P8-201ENST00000393490 348 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 MIR1302-4-201ENST00000408701 150 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 AC083863.1-201ENST00000438811 231 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RN7SL860P-201ENST00000473738 223 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.677-201ENST00000516401 85 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-365P-201ENST00000517113 106 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-537P-201ENST00000517277 103 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 MTND5P18-201ENST00000445624 1801 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGC3Q9UN70 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.625-201ENST00000411256 107 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 AF228730.3-201ENST00000436691 102 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 ATP5EP1-201ENST00000510257 156 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 RNU7-149P-201ENST00000516739 59 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 MIR6867-201ENST00000610636 67 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 JPX_2.1-201ENST00000614161 69 ntBASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGC3Q9UN70 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP443-201ENST00000363083 132 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-486P-201ENST00000363116 107 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP399-201ENST00000364003 117 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-438P-201ENST00000365561 103 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 MIR562-201ENST00000384894 95 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 YPEL5P3-201ENST00000547227 352 ntBASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGC3Q9UN70 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 MIR450A1-201ENST00000362262 91 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-1209P-201ENST00000363655 107 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.796-201ENST00000364268 102 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 Y_RNA.799-201ENST00000364992 102 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP252-201ENST00000391131 119 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP317-201ENST00000410176 116 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RN7SKP284-201ENST00000411002 343 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP311-201ENST00000411290 116 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 SNORA71B-202ENST00000439232 272 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RPS4XP11-201ENST00000446897 772 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 AL021397.1-201ENST00000451806 248 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 SNORA31.1-201ENST00000515993 133 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 SNORA31.5-201ENST00000516190 133 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP315-201ENST00000516340 116 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNU6-504P-201ENST00000516568 104 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 RNA5SP312-201ENST00000517068 116 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 AC011604.1-201ENST00000545978 196 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 AC013412.1-201ENST00000610687 192 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 AC106754.2-201ENST00000623006 233 ntBASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGC3Q9UN70 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.21□□□□□ -1.73
PCDHGC3Q9UN70 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGC3Q9UN70 RNU1-22P-201ENST00000363334 158 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-1083P-201ENST00000384022 107 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 RPL21P129-201ENST00000491732 478 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 AC018630.3-201ENST00000542637 96 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 CR392039.5-201ENST00000623201 510 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 AL049781.1-201ENST00000623195 3585 ntBASIC4.21□□□□□ -1.74
PCDHGC3Q9UN70 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms