Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-1287P-201ENST00000362914 107 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNY1P12-201ENST00000364251 105 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1060P-201ENST00000384664 107 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 MTND3P17-201ENST00000416968 344 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 MTCO2P23-201ENST00000425216 680 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNA5SP220-201ENST00000516298 104 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1220P-201ENST00000517126 108 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 AP002001.1-203ENST00000534002 267 ntBASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS29Q9UBQ0 MTND5P17-201ENST00000418405 1603 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1305P-201ENST00000364353 104 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 SNORA2.2-201ENST00000365473 135 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 Y_RNA.480-201ENST00000384364 102 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 RNU6-163P-201ENST00000384396 106 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 MIR586-201ENST00000385035 97 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC009237.7-201ENST00000447357 229 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 U7.7-201ENST00000459276 60 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 RNU7-57P-201ENST00000459540 60 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 MTCO2P6-201ENST00000463134 685 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC027419.1-201ENST00000522976 328 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC016957.1-201ENST00000534895 309 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC004584.2-201ENST00000570407 410 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AL078595.3-201ENST00000623815 1166 ntBASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.24□□□□□ -2.37
VPS29Q9UBQ0 SNORD89-201ENST00000390981 114 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC008134.1-201ENST00000420943 193 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC022493.2-201ENST00000506122 481 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC009159.2-201ENST00000617603 606 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC011155.2-201ENST00000623202 216 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 AC022418.1-201ENST00000624118 445 ntBASIC0.23□□□□□ -2.37
VPS29Q9UBQ0 RNU5F-6P-201ENST00000362979 116 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 SNORA20.2-201ENST00000383922 131 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 RNU1-119P-201ENST00000391122 165 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AL445305.1-201ENST00000432577 575 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 DAP3P1-201ENST00000441522 278 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 STAG3L5P-204ENST00000443759 179 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AC025647.1-201ENST00000517879 253 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 MTND1P15-201ENST00000579262 949 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AL391903.3-201ENST00000612158 163 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 AL049777.1-201ENST00000622740 518 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 snoZ196.1-201ENST00000625269 89 ntBASIC0.22□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1240P-201ENST00000365155 104 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 RNU6-1186P-201ENST00000410429 97 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC004866.1-201ENST00000411748 78 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 RPS3AP3-201ENST00000411933 242 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AL354692.1-201ENST00000423044 315 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 MTCO2P7-201ENST00000446518 666 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 LINC01399-202ENST00000458450 244 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 SNORA25.17-201ENST00000517184 124 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 RNU7-128P-201ENST00000517247 62 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC106038.2-201ENST00000520706 568 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC004832.4-201ENST00000608952 331 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC138749.5-201ENST00000611461 208 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC068792.1-201ENST00000621354 417 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 AC004808.1-201ENST00000627671 721 ntBASIC0.21□□□□□ -2.38
VPS29Q9UBQ0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 RNU1-139P-201ENST00000391307 165 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 MTCO3P8-201ENST00000453691 755 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 Y_RNA.672-201ENST00000516289 104 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 SNORD111.1-201ENST00000516421 86 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AC016256.1-201ENST00000547971 354 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AC234772.3-201ENST00000602277 528 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AC002044.1-201ENST00000606707 158 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 SNORA28-201ENST00000606769 126 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 AL096861.1-201ENST00000610899 123 ntBASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS29Q9UBQ0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 Y_RNA.367-201ENST00000365544 101 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms