Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.82□□□□□ -1.96
DDX56Q9NY93 RNU6-23P-201ENST00000363283 107 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 RNU6-727P-201ENST00000363592 107 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 U3.8-201ENST00000363675 217 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 RNU6-525P-201ENST00000363685 104 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 Y_RNA.202-201ENST00000364083 110 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 MTCO3P19-201ENST00000415864 321 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.82□□□□□ -1.96
DDX56Q9NY93 AC010095.1-201ENST00000443543 144 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 HMGB3P3-201ENST00000510526 400 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 AC067942.3-201ENST00000512025 362 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 RN7SKP49-201ENST00000516675 260 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 AC007742.2-201ENST00000618226 398 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 U2.1-201ENST00000618978 145 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 MIR4272-201ENST00000635924 64 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 AC099654.10-201ENST00000640395 161 ntBASIC2.82□□□□□ -1.96
DDX56Q9NY93 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
DDX56Q9NY93 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
DDX56Q9NY93 SNORA63-201ENST00000363450 132 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 Y_RNA.326-201ENST00000365176 113 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 SNORA70.4-201ENST00000365509 134 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 RNU1-138P-201ENST00000384093 164 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 RNU6-975P-201ENST00000384296 105 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DDX56Q9NY93 RNA5SP21-201ENST00000410917 96 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 RNU6-1001P-201ENST00000411265 100 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 S100A11P2-201ENST00000467589 312 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 AC107222.1-201ENST00000510899 637 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX56Q9NY93 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX56Q9NY93 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX56Q9NY93 SNORD58B-201ENST00000607313 66 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 AL606534.2-204ENST00000635008 178 ntBASIC2.81□□□□□ -1.96
DDX56Q9NY93 MTND4P1-201ENST00000457501 1466 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 MIR208A-201ENST00000362287 71 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 RNU6-1164P-201ENST00000364428 107 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 SNORA67.2-201ENST00000384300 149 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 RNU6-1235P-201ENST00000384559 107 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 SNORA44-201ENST00000384584 132 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 MIR329-1-201ENST00000385028 80 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC087499.2-201ENST00000432861 149 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 MTCO1P44-201ENST00000441935 243 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 RNU6-498P-201ENST00000459468 107 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 RNU7-57P-201ENST00000459540 60 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC074133.1-201ENST00000515696 183 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 SNORA25.10-201ENST00000515926 124 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AL442663.2-201ENST00000554385 511 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC007229.1-201ENST00000590455 412 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC125232.2-201ENST00000592457 143 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 VN1R91P-201ENST00000594377 169 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 MZT1P2-201ENST00000604387 248 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC016925.2-201ENST00000605108 242 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC040896.1-201ENST00000613819 479 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC012640.5-201ENST00000623897 319 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.8□□□□□ -1.96
DDX56Q9NY93 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX56Q9NY93 AC091812.1-201ENST00000432235 1948 ntBASIC2.8□□□□□ -1.96
DDX56Q9NY93 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DDX56Q9NY93 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
DDX56Q9NY93 RNU6-1145P-201ENST00000384246 107 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 RNU11-3P-201ENST00000391111 133 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 UQCRBP2-201ENST00000447827 297 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX56Q9NY93 AP001486.1-201ENST00000463339 476 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 AC010531.2-201ENST00000465012 153 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 SRIP1-201ENST00000489235 288 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 AC006600.1-201ENST00000572529 153 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 Y_RNA.812-201ENST00000610788 101 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 Y_RNA.784-201ENST00000613803 101 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX56Q9NY93 Y_RNA.787-201ENST00000616522 101 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 Y_RNA.780-201ENST00000617336 101 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 Y_RNA.801-201ENST00000619005 101 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.79□□□□□ -1.96
DDX56Q9NY93 SNORA33.2-201ENST00000365413 134 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 Y_RNA.415-201ENST00000384012 112 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 RNU6-418P-201ENST00000384035 107 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 AL590004.1-201ENST00000405321 300 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX56Q9NY93 AL135938.1-201ENST00000443141 297 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 PCNPP5-201ENST00000452246 481 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 RNU2-19P-201ENST00000517288 84 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DDX56Q9NY93 AL442163.3-201ENST00000554110 156 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 HSBP1P1-201ENST00000555205 166 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 MIR5188-201ENST00000583467 113 ntBASIC2.78□□□□□ -1.96
DDX56Q9NY93 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 RNU6-1301P-201ENST00000362724 104 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 RNA5SP493-201ENST00000364115 91 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 RNU6-708P-201ENST00000384217 107 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 261.7 ms