Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL512844.2-201ENST00000433990 593 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 AC005042.3-201ENST00000453230 174 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 RN7SL863P-201ENST00000462370 296 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 RN7SL499P-201ENST00000481141 276 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.28□□□□□ -1.88
CD248Q9HCU0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 RNU6-58P-201ENST00000517143 103 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 AC007536.1-201ENST00000533382 349 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 LINC00933-203ENST00000559812 219 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.88
CD248Q9HCU0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 RNU6-653P-201ENST00000363074 106 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 SNORD32A-201ENST00000364805 84 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 RNU6-211P-201ENST00000384047 107 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 Y_RNA.629-201ENST00000411368 105 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 AL714022.1-201ENST00000439897 151 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 Z82210.1-201ENST00000440037 231 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 HMGB3P3-201ENST00000510526 400 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 AL451007.1-201ENST00000595491 289 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 AL356157.2-201ENST00000605122 111 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 AC022441.3-201ENST00000605737 136 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 AL365222.1-201ENST00000614661 98 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 SNORA43.4-201ENST00000629559 138 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 snoU18.1-201ENST00000629629 71 ntBASIC3.27□□□□□ -1.89
CD248Q9HCU0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.27□□□□□ -1.89
CD248Q9HCU0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD248Q9HCU0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD248Q9HCU0 RNU6-942P-201ENST00000363002 107 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 Y_RNA.215-201ENST00000364204 112 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 SNORA72.2-201ENST00000365028 127 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 Z98749.2-208ENST00000381646 500 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 MIR627-201ENST00000384979 97 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 MIR487A-201ENST00000385009 80 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 MIR181B1-201ENST00000385240 110 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 Y_RNA.586-201ENST00000391146 98 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 AL358075.3-201ENST00000426289 226 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 RPL23AP95-201ENST00000426806 265 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.26□□□□□ -1.89
CD248Q9HCU0 RPS27P26-201ENST00000494583 239 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 AC097462.2-201ENST00000504623 481 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.26□□□□□ -1.89
CD248Q9HCU0 RNU6-703P-201ENST00000516946 107 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.26□□□□□ -1.89
CD248Q9HCU0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 AL162274.2-201ENST00000614406 332 ntBASIC3.26□□□□□ -1.89
CD248Q9HCU0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD248Q9HCU0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD248Q9HCU0 AL109809.4-201ENST00000603520 2185 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 Y_RNA.7-201ENST00000362352 102 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 SNORD115-8-201ENST00000363856 82 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 RNU6-312P-201ENST00000364629 107 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 SNORD115-38-201ENST00000365037 82 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 RNU1-140P-201ENST00000365040 165 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 Y_RNA.357-201ENST00000365487 109 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 RNU6-898P-201ENST00000365627 104 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 SNORD116-20-201ENST00000384529 92 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 RNU6-658P-201ENST00000384606 106 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 MIR767-201ENST00000390228 109 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 U3.26-201ENST00000391236 204 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.25□□□□□ -1.89
CD248Q9HCU0 GPM6BP3-201ENST00000442797 145 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 IFNA11P-201ENST00000446352 526 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
CD248Q9HCU0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.25□□□□□ -1.89
CD248Q9HCU0 SNRPGP7-201ENST00000469016 106 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 RNU6-191P-201ENST00000516295 94 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 LARP7P3-201ENST00000579888 337 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 AL357075.2-201ENST00000614906 189 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 MIR6852-201ENST00000621699 66 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
CD248Q9HCU0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD248Q9HCU0 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
CD248Q9HCU0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD248Q9HCU0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD248Q9HCU0 AL161431.1-201ENST00000618966 4205 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 SNORD56.1-201ENST00000362913 68 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 RNU4-80P-201ENST00000363200 141 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 RNU6-140P-201ENST00000384566 108 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.24□□□□□ -1.89
CD248Q9HCU0 AC010095.1-201ENST00000443543 144 ntBASIC3.24□□□□□ -1.89
CD248Q9HCU0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms