Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ELL2P3-201ENST00000457883 1602 ntBASIC0.48□□□□□ -2.33
CHMP4BQ9H444 RNU6-199P-201ENST00000362954 107 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RNU6-1305P-201ENST00000364353 104 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RNU6-1335P-201ENST00000365426 107 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 MIR122-201ENST00000385044 85 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 SNORA75.2-201ENST00000391138 150 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 SNORA75.3-201ENST00000391231 150 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 MRPL42P3-201ENST00000401492 326 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AL451046.2-201ENST00000403074 277 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AC004866.1-201ENST00000411748 78 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AL356583.2-201ENST00000426536 280 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AL596276.1-201ENST00000434465 418 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 EPS15P1-201ENST00000448836 336 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AC074290.1-201ENST00000448883 135 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RNU7-57P-201ENST00000459540 60 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RNU2-69P-201ENST00000516061 100 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AC022878.1-201ENST00000530684 149 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AC090049.2-201ENST00000550377 109 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RSL24D1P11-201ENST00000591045 491 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.47□□□□□ -2.33
CHMP4BQ9H444 AC006927.3-201ENST00000638789 384 ntBASIC0.47□□□□□ -2.33
CHMP4BQ9H444 RNU6-266P-201ENST00000364225 107 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 Y_RNA.224-201ENST00000364308 111 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU1-133P-201ENST00000364867 167 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU5E-5P-201ENST00000365379 116 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU6-434P-201ENST00000384376 107 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 SNORD116-13-201ENST00000384408 92 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 CDK8P2-201ENST00000415020 547 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 FABP5P4-201ENST00000437203 171 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 AL512286.1-201ENST00000439244 400 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 AC009237.7-201ENST00000447357 229 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 SNRPGP9-201ENST00000456025 225 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 RNU6-410P-201ENST00000517006 107 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.46□□□□□ -2.34
CHMP4BQ9H444 AC012557.2-201ENST00000605919 418 ntBASIC0.46□□□□□ -2.34
CHMP4BQ9H444 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC134026.1-201ENST00000623249 2239 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CHMP4BQ9H444 RNU6-163P-201ENST00000384396 106 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 MIR586-201ENST00000385035 97 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 SNORD70.1-201ENST00000391007 85 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CHMP4BQ9H444 RNU4-46P-201ENST00000410818 138 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.45□□□□□ -2.34
CHMP4BQ9H444 MTCO3P8-201ENST00000453691 755 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AL049830.1-201ENST00000468034 425 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.45□□□□□ -2.34
CHMP4BQ9H444 RNU6-917P-201ENST00000516294 104 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 Vault.3-201ENST00000516676 95 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 MIR4775-201ENST00000581168 75 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AL357312.1-201ENST00000603879 298 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 AC027514.1-201ENST00000588561 1603 ntBASIC0.45□□□□□ -2.34
CHMP4BQ9H444 RNU5F-7P-201ENST00000363696 115 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 RNU4-48P-201ENST00000365559 182 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 RNU6-1029P-201ENST00000384109 107 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 SNORA16.2-201ENST00000390991 127 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AL355143.1-201ENST00000407101 841 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.44□□□□□ -2.34
CHMP4BQ9H444 MTND3P17-201ENST00000416968 344 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AL606662.1-201ENST00000445763 553 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 RNU7-182P-201ENST00000459009 62 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.44□□□□□ -2.34
CHMP4BQ9H444 RNU6-496P-201ENST00000516145 99 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 RNU2-46P-201ENST00000517038 113 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AC025647.1-201ENST00000517879 253 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.44□□□□□ -2.34
CHMP4BQ9H444 MTND4P33-201ENST00000556706 766 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AP000907.4-201ENST00000604143 237 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
CHMP4BQ9H444 AP000568.1-201ENST00000282964 442 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CHMP4BQ9H444 MIR454-201ENST00000390180 115 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 RNA5SP247-201ENST00000411181 105 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.43□□□□□ -2.34
CHMP4BQ9H444 RNA5SP220-201ENST00000516298 104 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 RNU6-323P-201ENST00000521915 107 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.43□□□□□ -2.34
CHMP4BQ9H444 AL078603.1-201ENST00000603824 313 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
CHMP4BQ9H444 SNORD99-201ENST00000408612 74 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 RNU6-1186P-201ENST00000410429 97 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AC092423.1-201ENST00000430165 186 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.42□□□□□ -2.34
CHMP4BQ9H444 RPS29P15-201ENST00000458329 171 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AC079140.5-201ENST00000507882 310 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AP002001.1-203ENST00000534002 267 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AC016256.1-201ENST00000547971 354 ntBASIC0.42□□□□□ -2.34
CHMP4BQ9H444 AGGF1P4-201ENST00000568249 801 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms