Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS11Q9H270 PTMAP2-201ENST00000397627 327 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS11Q9H270 AL031121.1-201ENST00000406553 254 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 RNU2-52P-201ENST00000410680 190 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AL390729.2-201ENST00000416137 156 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS11Q9H270 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS11Q9H270 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS11Q9H270 RPL21P129-201ENST00000491732 478 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AC006445.1-201ENST00000491925 405 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 RNU7-121P-201ENST00000516604 62 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS11Q9H270 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS11Q9H270 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS11Q9H270 MIR3684-201ENST00000579779 74 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 MIR3158-1-201ENST00000583596 81 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 MIR4276-201ENST00000584832 70 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AC022441.3-201ENST00000605737 136 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS11Q9H270 AC006133.1-201ENST00000617106 264 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AC008873.1-201ENST00000625051 138 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 MIR4679-1-201ENST00000637619 75 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 AL353743.1-202ENST00000431724 1695 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS11Q9H270 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VPS11Q9H270 AC068700.1-201ENST00000565862 3754 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
VPS11Q9H270 AC138915.1-201ENST00000565427 1685 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS11Q9H270 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS11Q9H270 Y_RNA.43-201ENST00000362670 111 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 SNORA63.4-201ENST00000362763 126 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RNU6-1272P-201ENST00000362776 107 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RNU5B-2P-201ENST00000363036 113 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 MIR23B-201ENST00000384832 97 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RNU6-159P-201ENST00000391080 106 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS11Q9H270 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS11Q9H270 AC074117.2-201ENST00000417130 397 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 SNORA25.12-201ENST00000516202 82 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 Y_RNA.686-201ENST00000516548 134 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 SNORA67.7-201ENST00000516664 135 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 AC005176.2-201ENST00000596933 147 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 U3.45-201ENST00000607547 219 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 MIR3658-201ENST00000636291 56 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS11Q9H270 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.9
VPS11Q9H270 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS11Q9H270 Y_RNA.101-201ENST00000363154 102 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 Y_RNA.319-201ENST00000365138 92 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 MIR200C-201ENST00000384980 68 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 RNU6-239P-201ENST00000390990 99 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS11Q9H270 BTF3P11-201ENST00000426582 477 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 AC243964.1-201ENST00000441814 261 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 YWHAEP4-201ENST00000505390 198 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 RNU6-58P-201ENST00000517143 103 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 AP002001.1-203ENST00000534002 267 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS11Q9H270 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS11Q9H270 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS11Q9H270 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 MIR7515-201ENST00000637837 67 ntBASIC3.2□□□□□ -1.9
VPS11Q9H270 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS11Q9H270 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS11Q9H270 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS11Q9H270 AC010329.5-201ENST00000623497 2174 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VPS11Q9H270 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS11Q9H270 Z83843.1-201ENST00000604070 3685 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS11Q9H270 Y_RNA.121-201ENST00000363309 113 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 RNU6-527P-201ENST00000363425 104 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 SNORD32A-201ENST00000364805 84 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 RNU6-275P-201ENST00000364910 107 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 RNU4-11P-201ENST00000365287 132 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 Y_RNA.357-201ENST00000365487 109 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 RNU4-17P-201ENST00000365598 141 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 RNU6-1199P-201ENST00000411249 104 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS11Q9H270 AL133547.1-201ENST00000448546 220 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC005042.3-201ENST00000453230 174 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS11Q9H270 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
VPS11Q9H270 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS11Q9H270 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS11Q9H270 MIR4429-201ENST00000580105 73 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC039056.2-201ENST00000622261 511 ntBASIC3.19□□□□□ -1.9
VPS11Q9H270 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms