Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RNU6-271P-201ENST00000363858 105 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 SNORA63D-201ENST00000364359 132 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-1093P-201ENST00000391194 107 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AL606923.1-201ENST00000406616 190 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 USP9YP28-201ENST00000435142 589 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 MTCO3P38-201ENST00000468910 766 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-612P-201ENST00000516909 102 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC026470.2-201ENST00000561492 181 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC121247.2-201ENST00000604776 136 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AL353149.1-201ENST00000610667 244 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC073114.1-201ENST00000612027 490 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 AC008147.4-201ENST00000617570 1204 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.13□□□□□ -2.23
PCDH11XQ9BZA7 MIR302D-201ENST00000362275 68 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 RPS26P42-201ENST00000413485 326 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AC090960.1-201ENST00000421072 306 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 MTCO3P29-201ENST00000432119 779 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 HMGN1P33-201ENST00000432945 451 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 USP9YP29-201ENST00000445112 563 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 RPS26P55-201ENST00000471178 356 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 HMGB1P29-201ENST00000505659 499 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 Y_RNA.695-201ENST00000516715 107 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AC087854.1-201ENST00000519706 414 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AC063944.3-201ENST00000609969 533 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 AL354950.2-201ENST00000617939 290 ntBASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PCDH11XQ9BZA7 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 SNORD1A-201ENST00000364968 72 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 RNA5SP219-201ENST00000390940 113 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-1158P-201ENST00000391167 107 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AL117342.1-201ENST00000404861 406 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 CDK8P2-201ENST00000415020 547 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 MTCO2P19-201ENST00000427513 598 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 RPS29P27-201ENST00000463711 170 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AC099513.1-201ENST00000490423 301 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 CCDC34P1-201ENST00000507441 517 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AC025465.4-201ENST00000513422 638 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-189P-201ENST00000516120 101 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AC073648.5-201ENST00000603502 305 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AL158063.1-201ENST00000615349 536 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AC103705.1-201ENST00000619013 241 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
PCDH11XQ9BZA7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-877P-201ENST00000383868 107 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-17P-201ENST00000384245 107 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 RNU6-18P-201ENST00000384527 107 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 SNORD73A-201ENST00000386062 65 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 MIR1283-1-201ENST00000408494 87 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 U8.21-201ENST00000459536 136 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 AC108078.1-201ENST00000508073 725 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 RNA5SP437-201ENST00000517249 129 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 MIR4753-201ENST00000585119 83 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 AC005562.2-201ENST00000618264 111 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 Z69908.1-201ENST00000622603 247 ntBASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDH11XQ9BZA7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
PCDH11XQ9BZA7 AC100821.1-201ENST00000523153 2479 ntBASIC1.09□□□□□ -2.23
PCDH11XQ9BZA7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU6-545P-201ENST00000362681 104 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU5B-2P-201ENST00000363036 113 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 SNORA75-201ENST00000384158 137 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 SNORA29-201ENST00000384183 140 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AL161935.2-201ENST00000414627 60 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AC027119.1-201ENST00000440877 241 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 TPTE2P5-203ENST00000458118 728 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU6-956P-201ENST00000458868 103 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 snoU13.30-201ENST00000458951 104 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AC114982.1-201ENST00000469402 321 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 HMGN2P9-201ENST00000476875 229 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 BET1P1-201ENST00000482276 359 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AC079140.2-201ENST00000506193 142 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 AC011406.1-201ENST00000512440 370 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RN7SKP298-201ENST00000515950 94 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU6-948P-201ENST00000516374 107 ntBASIC1.09□□□□□ -2.24
PCDH11XQ9BZA7 RNU6-1069P-201ENST00000516612 133 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms