Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MIR143-201ENST00000385300 106 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AL603914.1-201ENST00000401964 204 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 FO393413.1-201ENST00000402892 195 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP511-201ENST00000410487 115 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU2-63P-201ENST00000410792 194 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SRIP3-201ENST00000413200 219 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 TBCAP1-201ENST00000436520 327 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RPL23AP93-201ENST00000440847 484 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU1-131P-201ENST00000458943 161 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RN7SL172P-201ENST00000460535 303 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC090515.1-201ENST00000465295 476 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RN7SL738P-201ENST00000470264 297 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RPS27P22-201ENST00000478056 241 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RN7SL170P-201ENST00000487098 295 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 OR9P1P-201ENST00000496431 281 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SCARNA22-201ENST00000503991 125 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 APOBEC3AP1-201ENST00000511396 287 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RAC1P5-201ENST00000512182 576 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SNORA4.4-201ENST00000515921 135 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 MIR449C-201ENST00000516047 92 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU7-172P-201ENST00000517125 64 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC006064.5-201ENST00000541782 248 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 MIR4271-201ENST00000582451 67 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC091178.2-201ENST00000584401 117 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC244505.7-201ENST00000599675 272 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP440-201ENST00000612665 119 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AL449363.1-201ENST00000617815 186 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 U4atac.1-201ENST00000618345 95 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC002064.3-201ENST00000623448 346 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 MIR1248-201ENST00000629190 106 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC244205.2-202ENST00000635781 342 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC058791.1-201ENST00000608412 3198 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 PWAR6-201ENST00000552334 4618 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC093010.3-201ENST00000570269 15214 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 IPO8P1-201ENST00000455509 3109 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 U3.2-201ENST00000362981 210 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU6-647P-201ENST00000364243 107 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 MIR181A2-201ENST00000384863 110 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 MIR223-201ENST00000385204 110 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 MIR891A-201ENST00000401237 79 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU2-48P-201ENST00000410694 191 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU2-70P-201ENST00000410718 179 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1328P-201ENST00000410938 106 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP127-201ENST00000411051 133 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU2-32P-201ENST00000411193 191 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RHEBP3-201ENST00000411920 351 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC003685.2-201ENST00000422795 395 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 NDUFB1P1-201ENST00000435191 180 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC006028.1-201ENST00000438379 402 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AL158147.1-201ENST00000443970 75 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AL500522.2-201ENST00000448562 343 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 CYCSP35-201ENST00000451978 304 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 snoU13.20-201ENST00000459180 104 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RPL35AP15-201ENST00000468042 339 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RN7SL271P-201ENST00000487601 295 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RN7SL636P-201ENST00000497504 294 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU6-772P-201ENST00000516042 105 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU7-99P-201ENST00000516271 62 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU6-589P-201ENST00000516485 107 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 RNU2-56P-201ENST00000516826 190 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 AC011604.1-201ENST00000545978 196 ntBASIC1.12□□□□□ -2.23
LCE3DQ9BYE3 HMGN2P6-201ENST00000551091 273 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms