Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNRPGP10-201ENST00000432323 225 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 MTATP8P2-201ENST00000435212 202 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 RPS26P48-201ENST00000491713 339 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 AC093249.4-201ENST00000564755 259 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 AL356218.2-201ENST00000605264 187 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 MIR4727-201ENST00000622232 55 ntBASIC4.06□□□□□ -1.76
USB1Q9BQ65 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USB1Q9BQ65 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USB1Q9BQ65 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USB1Q9BQ65 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 FAM35DP-201ENST00000323387 2712 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
USB1Q9BQ65 RNU1-83P-201ENST00000363426 164 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 SNORA56-201ENST00000383966 129 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 MIR450A2-201ENST00000385022 100 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 MIR767-201ENST00000390228 109 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 RNA5SP332-201ENST00000391063 115 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 SNORA19.1-201ENST00000410656 129 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 RPEP3-201ENST00000425462 676 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 HMGN2P18-201ENST00000450680 270 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 RN7SL41P-201ENST00000476144 297 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 RAC1P2-201ENST00000511164 579 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 MRPS36P2-201ENST00000512569 299 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 RN7SKP282-201ENST00000516824 299 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 RNU6-158P-201ENST00000517104 100 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 RNU6-586P-201ENST00000517265 104 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 AC209154.1-201ENST00000582156 337 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 AC008507.4-201ENST00000585464 127 ntBASIC4.05□□□□□ -1.76
USB1Q9BQ65 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USB1Q9BQ65 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USB1Q9BQ65 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
USB1Q9BQ65 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USB1Q9BQ65 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
USB1Q9BQ65 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USB1Q9BQ65 Y_RNA.78-201ENST00000362970 110 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 MIR548A2-201ENST00000384956 97 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 MIR1253-201ENST00000408273 105 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.04□□□□□ -1.76
USB1Q9BQ65 SNRPGP13-201ENST00000442212 177 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 AC025750.2-201ENST00000442609 450 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 RN7SL354P-201ENST00000469282 294 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 Y_RNA.685-201ENST00000516532 108 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 RNY4P20-201ENST00000516678 93 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 AC068657.1-201ENST00000520807 306 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 MIR4715-201ENST00000584117 79 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 SNORD115-40-201ENST00000606510 82 ntBASIC4.04□□□□□ -1.76
USB1Q9BQ65 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USB1Q9BQ65 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USB1Q9BQ65 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USB1Q9BQ65 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USB1Q9BQ65 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USB1Q9BQ65 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USB1Q9BQ65 Y_RNA.253-201ENST00000364562 112 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 SNORA62-201ENST00000365493 153 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 MIR141-201ENST00000384975 95 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.03□□□□□ -1.76
USB1Q9BQ65 AC011998.1-201ENST00000433403 117 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 RPS26P2-201ENST00000440331 348 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 AC141557.1-201ENST00000540982 400 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.03□□□□□ -1.76
USB1Q9BQ65 MIR4644-201ENST00000579929 84 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 MIR5197-201ENST00000583721 112 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 AC073413.2-201ENST00000604332 360 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 MALAT1.1-201ENST00000618249 95 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 AC006111.3-201ENST00000622137 383 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USB1Q9BQ65 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USB1Q9BQ65 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
USB1Q9BQ65 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USB1Q9BQ65 MAPK10-372ENST00000641954 3413 ntBASIC4.03□□□□□ -1.76
USB1Q9BQ65 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.03□□□□□ -1.76
USB1Q9BQ65 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.02□□□□□ -1.77
USB1Q9BQ65 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNU6-486P-201ENST00000363116 107 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNU6-592P-201ENST00000411333 103 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 AL356387.2-201ENST00000422272 243 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 AC009220.1-201ENST00000451614 275 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 AC233266.1-201ENST00000454518 96 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RPS26P28-201ENST00000470806 348 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNU6-830P-201ENST00000516353 107 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNU6-965P-201ENST00000516721 96 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNA5SP490-201ENST00000517141 136 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 RNU6-1231P-201ENST00000517185 103 ntBASIC4.02□□□□□ -1.77
USB1Q9BQ65 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms