Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
SMOQ99835 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.83□□□□□ -1.96
SMOQ99835 AC008264.2-201ENST00000610193 3731 ntBASIC2.83□□□□□ -1.96
SMOQ99835 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.83□□□□□ -1.96
SMOQ99835 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
SMOQ99835 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 RNU6-859P-201ENST00000362728 107 ntBASIC2.82□□□□□ -1.96
SMOQ99835 RNU1-72P-201ENST00000362976 153 ntBASIC2.82□□□□□ -1.96
SMOQ99835 RNU6-486P-201ENST00000363116 107 ntBASIC2.82□□□□□ -1.96
SMOQ99835 SNORD113-8-201ENST00000363497 74 ntBASIC2.82□□□□□ -1.96
SMOQ99835 RNU6-727P-201ENST00000363592 107 ntBASIC2.82□□□□□ -1.96
SMOQ99835 RNU6-379P-201ENST00000363813 104 ntBASIC2.82□□□□□ -1.96
SMOQ99835 RNU6-793P-201ENST00000384233 104 ntBASIC2.82□□□□□ -1.96
SMOQ99835 Y_RNA.602-201ENST00000410535 92 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC027124.2-201ENST00000428249 105 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC073901.1-201ENST00000462471 408 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC140059.1-201ENST00000489238 361 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC026241.1-201ENST00000517873 2142 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
SMOQ99835 MIR4672-201ENST00000583126 81 ntBASIC2.82□□□□□ -1.96
SMOQ99835 AC104984.5-201ENST00000586878 94 ntBASIC2.82□□□□□ -1.96
SMOQ99835 SNRPGP20-201ENST00000604477 205 ntBASIC2.82□□□□□ -1.96
SMOQ99835 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.82□□□□□ -1.96
SMOQ99835 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMOQ99835 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
SMOQ99835 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SMOQ99835 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMOQ99835 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SMOQ99835 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SMOQ99835 Y_RNA.16-201ENST00000362421 102 ntBASIC2.81□□□□□ -1.96
SMOQ99835 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
SMOQ99835 SNORA18.2-201ENST00000383865 132 ntBASIC2.81□□□□□ -1.96
SMOQ99835 SNORD63-201ENST00000384262 68 ntBASIC2.81□□□□□ -1.96
SMOQ99835 RNU6-301P-201ENST00000384277 107 ntBASIC2.81□□□□□ -1.96
SMOQ99835 Y_RNA.476-201ENST00000384347 108 ntBASIC2.81□□□□□ -1.96
SMOQ99835 Y_RNA.541-201ENST00000384640 113 ntBASIC2.81□□□□□ -1.96
SMOQ99835 Y_RNA.581-201ENST00000391017 97 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
SMOQ99835 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
SMOQ99835 RPL30P4-201ENST00000429309 333 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.81□□□□□ -1.96
SMOQ99835 IFNA11P-201ENST00000446352 526 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AC007395.1-201ENST00000451333 677 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.81□□□□□ -1.96
SMOQ99835 HSPE1P18-201ENST00000517602 280 ntBASIC2.81□□□□□ -1.96
SMOQ99835 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.81□□□□□ -1.96
SMOQ99835 MIR4423-201ENST00000580922 80 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AC012433.1-201ENST00000588916 398 ntBASIC2.81□□□□□ -1.96
SMOQ99835 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
SMOQ99835 SDR42E1P4-201ENST00000620894 481 ntBASIC2.81□□□□□ -1.96
SMOQ99835 U6.104-201ENST00000637979 90 ntBASIC2.81□□□□□ -1.96
SMOQ99835 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SMOQ99835 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.81□□□□□ -1.96
SMOQ99835 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SMOQ99835 MTND5P6-201ENST00000422338 1798 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RNU6-626P-201ENST00000363354 107 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RNU5F-3P-201ENST00000363767 117 ntBASIC2.8□□□□□ -1.96
SMOQ99835 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RNU6-1318P-201ENST00000365389 103 ntBASIC2.8□□□□□ -1.96
SMOQ99835 Y_RNA.350-201ENST00000365409 98 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RNU6-20P-201ENST00000384106 107 ntBASIC2.8□□□□□ -1.96
SMOQ99835 Y_RNA.562-201ENST00000384695 113 ntBASIC2.8□□□□□ -1.96
SMOQ99835 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
SMOQ99835 AC096920.1-201ENST00000423991 241 ntBASIC2.8□□□□□ -1.96
SMOQ99835 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.8□□□□□ -1.96
SMOQ99835 AC108059.2-201ENST00000434626 151 ntBASIC2.8□□□□□ -1.96
SMOQ99835 AC004386.2-201ENST00000441858 148 ntBASIC2.8□□□□□ -1.96
SMOQ99835 HSPE1P25-201ENST00000455484 251 ntBASIC2.8□□□□□ -1.96
SMOQ99835 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.8□□□□□ -1.96
SMOQ99835 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
SMOQ99835 RNU6-496P-201ENST00000516145 99 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
SMOQ99835 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.8□□□□□ -1.96
SMOQ99835 MIR3162-201ENST00000581818 82 ntBASIC2.8□□□□□ -1.96
SMOQ99835 MIR3128-201ENST00000581957 66 ntBASIC2.8□□□□□ -1.96
SMOQ99835 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
SMOQ99835 AC090517.3-201ENST00000625170 141 ntBASIC2.8□□□□□ -1.96
SMOQ99835 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SMOQ99835 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
SMOQ99835 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
SMOQ99835 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMOQ99835 Y_RNA.237-201ENST00000364439 102 ntBASIC2.79□□□□□ -1.96
SMOQ99835 SNORA68.1-201ENST00000364537 132 ntBASIC2.79□□□□□ -1.96
SMOQ99835 Y_RNA.286-201ENST00000364813 102 ntBASIC2.79□□□□□ -1.96
SMOQ99835 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMOQ99835 Y_RNA.462-201ENST00000384268 102 ntBASIC2.79□□□□□ -1.96
SMOQ99835 Y_RNA.477-201ENST00000384352 108 ntBASIC2.79□□□□□ -1.96
SMOQ99835 MIR218-1-201ENST00000384999 110 ntBASIC2.79□□□□□ -1.96
SMOQ99835 RNU4-30P-201ENST00000410245 143 ntBASIC2.79□□□□□ -1.96
SMOQ99835 ELOCP21-201ENST00000412558 336 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
SMOQ99835 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.79□□□□□ -1.96
SMOQ99835 UQCRBP2-201ENST00000447827 297 ntBASIC2.79□□□□□ -1.96
SMOQ99835 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
SMOQ99835 RNU6-1338P-201ENST00000516328 91 ntBASIC2.79□□□□□ -1.96
SMOQ99835 DEFB108E-201ENST00000524692 240 ntBASIC2.79□□□□□ -1.96
SMOQ99835 AK6P2-201ENST00000549020 471 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms