Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6-38P-201ENST00000384085 107 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 Y_RNA.504-201ENST00000384481 104 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 RNU6-296P-201ENST00000384608 107 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MIR181A1-201ENST00000385026 110 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 SNORD37.1-201ENST00000390968 65 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MIR300-201ENST00000401138 83 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MIR548F1-201ENST00000408667 84 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 RNU6-908P-201ENST00000410160 94 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 RNU6-1068P-201ENST00000410958 103 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC012306.1-201ENST00000423267 114 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 SNRPEP8-201ENST00000442866 260 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL21A1Q96P44 ATP5J2P3-201ENST00000451550 258 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MTCYBP18-201ENST00000501056 747 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MTND4P7-201ENST00000523876 130 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MIR5094-201ENST00000578766 85 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC146944.4-201ENST00000602697 718 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC004492.1-201ENST00000607036 742 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.23□□□□□ -2.21
COL21A1Q96P44 AL450472.1-202ENST00000637286 180 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 MIR340-201ENST00000362125 95 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 Y_RNA.132-201ENST00000363421 102 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-1019P-201ENST00000364424 107 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-192P-201ENST00000391253 100 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 RPL21P111-201ENST00000418453 477 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 MTCO1P20-201ENST00000425366 358 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 MTND1P34-201ENST00000438556 671 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 JTBP1-201ENST00000441314 247 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 MTND3P16-201ENST00000452205 344 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-1037P-201ENST00000459571 107 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 MTCO3P38-201ENST00000468910 766 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-1098P-201ENST00000516772 96 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC090115.3-201ENST00000553218 849 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AL157687.1-201ENST00000554853 619 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-85P-201ENST00000605989 107 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 MIR1321-201ENST00000637766 79 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC068137.3-201ENST00000639191 341 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 AC073869.6-201ENST00000640656 341 ntBASIC1.22□□□□□ -2.21
COL21A1Q96P44 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.22□□□□□ -2.21
COL21A1Q96P44 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
COL21A1Q96P44 RNU6-562P-201ENST00000362731 107 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU6-451P-201ENST00000362921 107 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU6-82P-201ENST00000363970 107 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU4-66P-201ENST00000365199 138 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU4-12P-201ENST00000365233 139 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 Y_RNA.378-201ENST00000365652 113 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 Y_RNA.450-201ENST00000384198 113 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU6-378P-201ENST00000384324 107 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 Y_RNA.505-201ENST00000384489 102 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MIR514A2-201ENST00000385131 88 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MIR514A3-201ENST00000385132 88 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RNA5SP219-201ENST00000390940 113 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MIR208B-201ENST00000401172 77 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MTND1P4-201ENST00000435196 415 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 SEPT14P3-201ENST00000439401 183 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL732372.2-207ENST00000445840 183 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 SEPT14P2-201ENST00000453405 183 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 RPL26P26-201ENST00000480251 434 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 SEPT14P4-201ENST00000513445 186 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 FO082796.1-201ENST00000523795 183 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 CENPUP1-201ENST00000526649 1202 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MTND1P35-201ENST00000526739 508 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AP003033.1-201ENST00000527244 415 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 ZNF519P2-201ENST00000557032 169 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC026470.2-201ENST00000561492 181 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC090517.1-201ENST00000569307 266 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL162413.1-201ENST00000603198 110 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC080078.2-201ENST00000603766 501 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms